RNA–Protein interactions for RNA: ENST00000428626.5

SEC13-210, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 3

Gene SEC13, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-210ENST00000428626 TBC1D17Q9HA65 648 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 ANKFY1Q9P2R3 1169 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 SPTBN4Q9H254 2564 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 GVINP1Q7Z2Y8 2422 aa16.99■□□□□ 0.31
SEC13-210ENST00000428626 WDR87Q6ZQQ6 2873 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 TOM1L1O75674 476 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 POU2F2P09086 479 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 GPC5P78333 572 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 MRPL58Q14197 206 aaKnown RBP16.98■□□□□ 0.31
SEC13-210ENST00000428626 SLC5A9Q2M3M2 681 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 UVSSAQ2YD98 709 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 SLC8B1Q6J4K2 584 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 ANKS3Q6ZW76 656 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 FRMD5Q7Z6J6 570 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 NPAS3Q8IXF0 933 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 RTP3Q9BQQ7 232 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 TIPINQ9BVW5 301 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 SLC2A4RGQ9NR83 387 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 TUBGCP4Q9UGJ1 667 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 KIF3AQ9Y496 699 aa16.98■□□□□ 0.31
SEC13-210ENST00000428626 CACNA1IQ9P0X4 2223 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 TRAPPC3O43617 180 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 ABLIM3O94929 683 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 SEC24AO95486 1093 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 SPAG1Q07617 926 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 MCL1Q07820 350 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 NOLC1Q14978 699 aaKnown RBP eCLIP16.97■□□□□ 0.31
SEC13-210ENST00000428626 ANGPT1Q15389 498 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 ARL6IP4Q66PJ3 421 aaKnown RBP16.97■□□□□ 0.31
SEC13-210ENST00000428626 ING5Q8WYH8 240 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 ARHGEF3Q9NR81 526 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 BLOC1S4Q9NUP1 217 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 SLC38A7Q9NVC3 462 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 DLGAP2Q9P1A6 1054 aa16.97■□□□□ 0.31
SEC13-210ENST00000428626 DAXXQ9UER7 740 aaPredicted RBP16.97■□□□□ 0.31
SEC13-210ENST00000428626 ZFP37Q9Y6Q3 630 aaPredicted RBP16.97■□□□□ 0.31
SEC13-210ENST00000428626 PRR23AA6NEV1 266 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 H3BQV1 296 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 XYLBO75191 536 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 LRRN2O75325 713 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 CENPBP07199 599 aaPredicted RBP16.96■□□□□ 0.31
SEC13-210ENST00000428626 CXCL8P10145 99 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 GLULP15104 373 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 TNFSF9P41273 254 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 NCKAP1LP55160 1127 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 STRN3Q13033 797 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 PABPC1LQ4VXU2 614 aaKnown RBP16.96■□□□□ 0.31
SEC13-210ENST00000428626 ZBTB41Q5SVQ8 909 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 ZPBP2Q6X784 338 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 ZNF461Q8TAF7 563 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 SUSD3Q96L08 255 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 KXD1Q9BQD3 176 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 REEP2Q9BRK0 252 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 FOXQ1Q9C009 403 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 FBXL5Q9UKA1 691 aa16.96■□□□□ 0.31
SEC13-210ENST00000428626 EP300Q09472 2414 aaPredicted RBP16.96■□□□□ 0.3
SEC13-210ENST00000428626 ARHGEF37A1IGU5 675 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 STK25O00506 426 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 SYN3O14994 580 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 FAM189A1O60320 539 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 DCNP07585 359 aaKnown RBP16.95■□□□□ 0.3
SEC13-210ENST00000428626 RHOP08100 348 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 RPL9P32969 192 aaKnown RBP16.95■□□□□ 0.3
SEC13-210ENST00000428626 ARPP19P56211 112 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 HAUS6Q7Z4H7 955 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 KCTD17Q8N5Z5 321 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 TBC1D32Q96NH3 1257 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 FIZ1Q96SL8 496 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 PLA2G2FQ9BZM2 168 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 SMC3Q9UQE7 1217 aa16.95■□□□□ 0.3
SEC13-210ENST00000428626 TTC26A0AVF1 554 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 CLDN3O15551 220 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 ATF2P15336 505 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 CEBPBP17676 345 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 CCR2P41597 374 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 GUCY2FP51841 1108 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 SMTNP53814 917 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 DHX8Q14562 1220 aaKnown RBP16.94■□□□□ 0.3
SEC13-210ENST00000428626 MCM6Q14566 821 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 ZBTB6Q15916 424 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 SPECC1Q5M775 1068 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
SEC13-210ENST00000428626 PHLDB3Q6NSJ2 640 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 SLC39A4Q6P5W5 647 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 GPBP1Q86WP2 473 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 KCNN1Q92952 543 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 TCEAL4Q96EI5 215 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 MCRS1Q96EZ8 462 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 CDK5RAP3Q96JB5 506 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 KCND2Q9NZV8 630 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 KCNH3Q9ULD8 1083 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 NUB1Q9Y5A7 615 aa16.94■□□□□ 0.3
SEC13-210ENST00000428626 PPEF2O14830 753 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 VNN2O95498 520 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 PLCG1P19174 1290 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 MCM4P33991 863 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 ZNF131P52739 623 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 STARD6P59095 220 aa16.93■□□□□ 0.3
SEC13-210ENST00000428626 SNW1Q13573 536 aaKnown RBP16.93■□□□□ 0.3
SEC13-210ENST00000428626 KARSQ15046 597 aaKnown RBP16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms