RNA–Protein interactions for RNA: ENST00000428287.6

RIF1-203, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-203ENST00000428287 ZNF34Q8IZ26 560 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 BTBD10Q9BSF8 475 aa5.46□□□□□ -1.53
RIF1-203ENST00000428287 INO80BQ9C086 356 aaPredicted RBP5.46□□□□□ -1.53
RIF1-203ENST00000428287 FKBP6O75344 327 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 TM7SF2O76062 418 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 CYP1A1P04798 512 aaPredicted RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 MYL4P12829 197 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 STX2P32856 288 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 PPP4CP60510 307 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 INTS8Q75QN2 995 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 CCDC65Q8IXS2 484 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 PRICKLE1Q96MT3 831 aaPredicted RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 NLRP3Q96P20 1036 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 TRPV5Q9NQA5 729 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 NKIRAS1Q9NYS0 192 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SORCS3Q9UPU3 1222 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 ATRNL1Q5VV63 1379 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 UBR3Q6ZT12 1888 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 TXKP42681 527 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SLC12A3P55017 1021 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 COASYQ13057 564 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 KIF22Q14807 665 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 KNOP1Q1ED39 458 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 MUM1Q2TAK8 710 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 CERKLQ49MI3 558 aaPredicted RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 EFHC2Q5JST6 749 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SYCP2LQ5T4T6 812 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 MYLK4Q86YV6 388 aaPredicted RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 SRRM1Q8IYB3 904 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 RASGRP4Q8TDF6 673 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 WDR60Q8WVS4 1066 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 TSG101Q99816 390 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 ZSWIM1Q9BR11 485 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 CENPKQ9BS16 269 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SLC24A2Q9UI40 661 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 LRRC37AA6NMS7 1700 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SH3PXD2BA1X283 911 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 GRIN3BO60391 1043 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SNHG28P0DPA3 235 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 COILP38432 576 aaPredicted RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 POLE2P56282 527 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SFR1Q86XK3 245 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 GFM2Q969S9 779 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 NSUN4Q96CB9 384 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 DNAJC18Q9H819 358 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SLC7A8Q9UHI5 535 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 FREM3P0C091 2139 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 LRRK1Q38SD2 2015 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 CBX6O95503 412 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 ATP5BP06576 529 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 GCAP28676 217 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 USP46P62068 366 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 SPIDRQ14159 915 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 NONOQ15233 471 aaKnown RBP eCLIP5.46□□□□□ -1.54
RIF1-203ENST00000428287 C12orf60Q5U649 245 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 ZC3H18Q86VM9 953 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 MED12LQ86YW9 2145 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 CCDC125Q86Z20 511 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 TMPRSS6Q8IU80 811 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 ITPKCQ96DU7 683 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 MPHOSPH6Q99547 160 aaKnown RBP5.46□□□□□ -1.54
RIF1-203ENST00000428287 C5orf42Q9H799 3197 aa5.46□□□□□ -1.54
RIF1-203ENST00000428287 PLXND1Q9Y4D7 1925 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 RASA4BC9J798 803 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 hCG_1984214I3L0E3 225 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 MAFGO15525 162 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 RASA4O43374 803 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 LRRN2O75325 713 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 CD48P09326 243 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 OXCT1P55809 520 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 MOXD1Q6UVY6 613 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 NLRP9Q7RTR0 991 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 MARVELD2Q8N4S9 558 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 ALLCQ8N6M5 410 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 ZNF713Q8N859 430 aaPredicted RBP5.45□□□□□ -1.54
RIF1-203ENST00000428287 SPOCK2Q92563 424 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 LSM14BQ9BX40 385 aaKnown RBP5.45□□□□□ -1.54
RIF1-203ENST00000428287 AZI2Q9H6S1 392 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 GGT7Q9UJ14 662 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 PCDHA12Q9UN75 941 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 VIL1P09327 827 aaKnown RBP5.45□□□□□ -1.54
RIF1-203ENST00000428287 CDH2P19022 906 aaPredicted RBP5.45□□□□□ -1.54
RIF1-203ENST00000428287 KCNJ1P48048 391 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 MARCKSL1P49006 195 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 UBE4AQ14139 1066 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 KYNUQ16719 465 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 SMYD5Q6GMV2 418 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 SPATA24Q86W54 205 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 ZNF75CPQ92670 426 aaPredicted RBP5.45□□□□□ -1.54
RIF1-203ENST00000428287 FGFBP2Q9BYJ0 223 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 MAF1Q9H063 256 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 GPAMQ9HCL2 828 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 LRRC4BQ9NT99 713 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 MTUS1Q9ULD2 1270 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 ZNF232Q9UNY5 417 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 COQ4Q9Y3A0 265 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 PLIN4Q96Q06 1357 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 ATP9AO75110 1047 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 SOX5P35711 763 aa5.45□□□□□ -1.54
RIF1-203ENST00000428287 TECP42680 631 aa5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms