RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 CDHR5Q9HBB8 845 aa19.35■□□□□ 0.69
AC055811.2-201ENST00000427497 MTMR10Q9NXD2 777 aa19.35■□□□□ 0.69
AC055811.2-201ENST00000427497 R3HCC1Q9Y3T6 440 aaKnown RBP19.35■□□□□ 0.69
AC055811.2-201ENST00000427497 PCDHA13Q9Y5I0 950 aa19.35■□□□□ 0.69
AC055811.2-201ENST00000427497 FOXN3O00409 490 aaPredicted RBP19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 FANCGO15287 622 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 ERLIN2O94905 339 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 HLA-DRAP01903 254 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 GFPT1Q06210 699 aaPredicted RBP19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 TMEM62Q0P6H9 643 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 ARHGAP44Q17R89 818 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 MFSD5Q6N075 450 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 KIAA1328Q86T90 577 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 CEP120Q8N960 986 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 OR5B17Q8NGF7 314 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 ZNF592Q92610 1267 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 CPB2Q96IY4 423 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 SYT11Q9BT88 431 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 SEZ6LQ9BYH1 1024 aa19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 IFIH1Q9BYX4 1025 aaKnown RBP19.34■□□□□ 0.69
AC055811.2-201ENST00000427497 A0A087X0T9 212 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 TULP1O00294 542 aaPredicted RBP19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 B4GALT4O60513 344 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 CCDC172P0C7W6 258 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 FAM228BP0C875 321 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 DARSP14868 501 aaKnown RBP19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 GNG11P61952 73 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 NBPF20Q3BBV1 942 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 FAM109BQ6ICB4 259 aaPredicted RBP19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 PPM1KQ8N3J5 372 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 NME8Q8N427 588 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 OLIG1Q8TAK6 271 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 SHC3Q92529 594 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 KAT5Q92993 513 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 JAKMIP2Q96AA8 810 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 WDR24Q96S15 920 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 IRX2Q9BZI1 471 aaPredicted RBP19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 LACRTQ9GZZ8 138 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 GTF2IRD1Q9UHL9 959 aa19.33■□□□□ 0.69
AC055811.2-201ENST00000427497 KIF5CO60282 957 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 CLTAP09496 248 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 MFAP3P55082 362 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 GCNT1Q02742 428 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 KYAT1Q16773 422 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 TATDN2Q93075 761 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 RNPC3Q96LT9 517 aaKnown RBP19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 OSMRQ99650 979 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 MYO1AQ9UBC5 1043 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 TRIM10Q9UDY6 481 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 ADAMTS1Q9UHI8 967 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 DNAI1Q9UI46 699 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 NENFQ9UMX5 172 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 TFR2Q9UP52 801 aa19.33■□□□□ 0.68
AC055811.2-201ENST00000427497 PJA2O43164 708 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 KRT86O43790 486 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 IL18RAPO95256 599 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 STAG3L1P0CL83 205 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 EIF4BP23588 611 aaKnown RBP19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 HOXA11P31270 313 aaPredicted RBP19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 PIK3CAP42336 1068 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 MAGEA1P43355 309 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 BIRC3Q13489 604 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 CCDC122Q5T0U0 273 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 TAF2Q6P1X5 1199 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 ENOSF1Q7L5Y1 443 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 TMEM192Q8IY95 271 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 FAM71AQ8IYT1 594 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 FAM81BQ96LP2 452 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 PI4K2AQ9BTU6 479 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 PPP1R12CQ9BZL4 782 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 TSGA10Q9BZW7 698 aa19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 RPF1Q9H9Y2 349 aaKnown RBP19.32■□□□□ 0.68
AC055811.2-201ENST00000427497 MEFVO15553 781 aaPredicted RBP19.31■□□□□ 0.68
AC055811.2-201ENST00000427497 FGFR4P22455 802 aa19.31■□□□□ 0.68
AC055811.2-201ENST00000427497 SMAD3P84022 425 aaKnown RBP19.31■□□□□ 0.68
AC055811.2-201ENST00000427497 SESTD1Q86VW0 696 aa19.31■□□□□ 0.68
AC055811.2-201ENST00000427497 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.31■□□□□ 0.681e-7■■■■■ 76.9
AC055811.2-201ENST00000427497 CXCL8P10145 99 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 CRYBB1P53674 252 aaPredicted RBP19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 OSTNP61366 133 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 KIF5AQ12840 1032 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 PPIGQ13427 754 aaKnown RBP eCLIP19.3■□□□□ 0.687e-8■□□□□ 9.4
AC055811.2-201ENST00000427497 BMS1Q14692 1282 aaKnown RBP19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 DUOXA2Q1HG44 320 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 WDR44Q5JSH3 913 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 CATSPER4Q7RTX7 472 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 VPS36Q86VN1 386 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 EFCAB13Q8IY85 973 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 TXLNBQ8N3L3 684 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 TMEM199Q8N511 208 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 SLC30A5Q8TAD4 765 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 ADPGKQ9BRR6 497 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 TRPV6Q9H1D0 765 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 C1orf112Q9NSG2 853 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 GUCA1BQ9UMX6 200 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 GINS2Q9Y248 185 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 CSF2RAP15509 400 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 TERF1P54274 439 aa19.3■□□□□ 0.68
AC055811.2-201ENST00000427497 NCOA4Q13772 614 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms