RNA–Protein interactions for RNA: ENST00000426840.1

LINC01049-201, Transcript of long intergenic non-protein coding RNA 1049, humanhuman

TSL 1 (best) BASIC

Gene LINC01049, Length 742 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01049-201ENST00000426840 SEZ6Q53EL9 994 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 XKR4Q5GH76 650 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 SLFN12LQ6IEE8 588 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 CRELD2Q6UXH1 353 aaPredicted RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 ALKAL1Q6UXT8 129 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 STXBP4Q6ZWJ1 553 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 SPRED2Q7Z698 418 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 RNF135Q8IUD6 432 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 NELFCDQ8IXH7 590 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 THNSL1Q8IYQ7 743 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 HELQQ8TDG4 1101 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 SMARCE1Q969G3 411 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 CCDC47Q96A33 483 aaKnown RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 TIFAQ96CG3 184 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 BICD1Q96G01 975 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 GAD1Q99259 594 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 APOL6Q9BWW8 343 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 TRIM6Q9C030 488 aaPredicted RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 KCTD10Q9H3F6 313 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 CLSTN2Q9H4D0 955 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 CWH43Q9H720 699 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 RSAD1Q9HA92 442 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 POLMQ9NP87 494 aaPredicted RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 UBN1Q9NPG3 1134 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 TYW1Q9NV66 732 aaKnown RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 KLK14Q9P0G3 267 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 PARP2Q9UGN5 583 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 HOOK1Q9UJC3 728 aaKnown RBP8.09□□□□□ -1.11
LINC01049-201ENST00000426840 MAN1B1Q9UKM7 699 aa8.09□□□□□ -1.11
LINC01049-201ENST00000426840 ZMYM2Q9UBW7 1377 aa8.09□□□□□ -1.12
LINC01049-201ENST00000426840 MYO9BQ13459 2157 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 UBE4BO95155 1302 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 TRIP11Q15643 1979 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ARL5CA6NH57 179 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 TTLL8A6PVC2 850 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 HNRNPDLO14979 420 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 OGTO15294 1046 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 DDHD2O94830 711 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ADRB2P07550 413 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 CLTAP09496 248 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 GARTP22102 1010 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 TNFSF9P41273 254 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 CTSOP43234 321 aaPredicted RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 FXR1P51114 621 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 OSTNP61366 133 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ERVK-21P61565 698 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 SNRPFP62306 86 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 MORC3Q14149 939 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 BTG3Q14201 252 aaPredicted RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 NOLC1Q14978 699 aaKnown RBP eCLIP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 KNOP1Q1ED39 458 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 SLC10A6Q3KNW5 377 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 COBLL1Q53SF7 1204 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 NOMO2Q5JPE7 1267 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ZBTB41Q5SVQ8 909 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ZNF658Q5TYW1 1059 aaPredicted RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ISM2Q6H9L7 571 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 GLB1LQ6UWU2 654 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 APBB1IPQ7Z5R6 666 aaPredicted RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ZNF280BQ86YH2 543 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 HACE1Q8IYU2 909 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 SYCP3Q8IZU3 236 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 GUF1Q8N442 669 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ZSWIM2Q8NEG5 633 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 CLP1Q92989 425 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ACAP3Q96P50 834 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 CBWD1Q9BRT8 395 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 CCDC94Q9BW85 323 aaPredicted RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 GBP3Q9H0R5 595 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 TTYH1Q9H313 450 aaPredicted RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 SEMA6BQ9H3T3 888 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 PCIF1Q9H4Z3 704 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 NRDE2Q9H7Z3 1164 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 SLC28A3Q9HAS3 691 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 DMAC2Q9NW81 257 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 RMND1Q9NWS8 449 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 ANKFY1Q9P2R3 1169 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 DNMT3LQ9UJW3 386 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 CPSF3Q9UKF6 684 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 AGO2Q9UKV8 859 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 MAPK8IP1Q9UQF2 711 aa8.08□□□□□ -1.12
LINC01049-201ENST00000426840 MRPL42Q9Y6G3 142 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 RANBP2P49792 3224 aaKnown RBP8.08□□□□□ -1.12
LINC01049-201ENST00000426840 TMEM265A0A087WTH1 108 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 TTC26A0AVF1 554 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 PDXKO00764 312 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 PTGESO14684 152 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 CLIC2O15247 247 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 SPINT1O43278 529 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 B4GALT3O60512 393 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 RECQL4O94761 1208 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 POMCP01189 267 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 HARSP12081 509 aaKnown RBP8.07□□□□□ -1.12
LINC01049-201ENST00000426840 BMPR1AP36894 532 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 MLH1P40692 756 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 PRCPP42785 496 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 PTGIRP43119 386 aa8.07□□□□□ -1.12
LINC01049-201ENST00000426840 MATR3P43243 847 aaKnown RBP eCLIP8.07□□□□□ -1.12
LINC01049-201ENST00000426840 ACOT2P49753 483 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms