RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 RBM15Q96T37 977 aaKnown RBP eCLIP8.01□□□□□ -1.136e-7■□□□□ 10.9
SMARCC1-202ENST00000425518 AGO4Q9HCK5 861 aaKnown RBP8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 SAYSD1Q9NPB0 183 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 DONSONQ9NYP3 566 aa8.01□□□□□ -1.13
SMARCC1-202ENST00000425518 TESPA1A2RU30 521 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 HNRNPDLO14979 420 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 CDH16O75309 829 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ZSCAN5DPP0CG00 497 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MAPTP10636 758 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 KRT10P13645 584 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 KRT15P19012 456 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 TNNI1P19237 187 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MSH2P43246 934 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 GPC3P51654 580 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 LACTBP83111 547 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 DNAJC3Q13217 504 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 P3H1Q32P28 736 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 GALNTL6Q49A17 601 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ATP13A4Q4VNC1 1196 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 SPOPLQ6IQ16 392 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 SPOCK2Q92563 424 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 OSBPL8Q9BZF1 889 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 RXFP1Q9HBX9 757 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 RAVER2Q9HCJ3 691 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 NOP53Q9NZM5 478 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF148Q9UQR1 794 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 EXOC1LA0A1B0GW35 172 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 SKAP2O75563 359 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 OAS1P00973 400 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 CFHP08603 1231 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MAN1A1P33908 653 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MAGEA4P43358 317 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 TAS2R40P59535 323 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MRPS9P82933 396 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 ATP11AP98196 1134 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 IL9RQ01113 521 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 PLCB3Q01970 1234 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 STRN3Q13033 797 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 RIPK1Q13546 671 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ZNF568Q3ZCX4 644 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 TLDC1Q6P9B6 456 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 CRELD2Q6UXH1 353 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 ERICH1Q86X53 443 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 C4orf33Q8N1A6 199 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ANKRD35Q8N283 1001 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 CCDC89Q8N998 374 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 TMEM161BQ8NDZ6 487 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 HAUS1Q96CS2 278 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 TAAR1Q96RJ0 339 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 C1orf112Q9NSG2 853 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 HERC5Q9UII4 1024 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 MROH7Q68CQ1 1323 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ADAMTSL1Q8N6G6 1762 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ATF7P17544 494 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 TAC1P20366 129 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 PAX7P23759 505 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MGAT5Q09328 741 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 WDR44Q5JSH3 913 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ECHDC2Q86YB7 292 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 TAB3Q8N5C8 712 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 SLC17A8Q8NDX2 589 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 DDX27Q96GQ7 796 aaKnown RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 CEP170P1Q96L14 293 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 MAGEB18Q96M61 343 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 VPS37BQ9H9H4 285 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 KIF9Q9HAQ2 790 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 SLCO1B3Q9NPD5 702 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ADAM22Q9P0K1 906 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 C15orf41Q9Y2V0 281 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 CEP83Q9Y592 693 aa8□□□□□ -1.13
SMARCC1-202ENST00000425518 ASTN2O75129 1339 aaPredicted RBP8□□□□□ -1.13
SMARCC1-202ENST00000425518 NPM3O75607 178 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 RAD17O75943 681 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 IFNB1P01574 187 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 ETS1P14921 441 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CHRNA5P30532 468 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PSMC5P62195 406 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CAV1Q03135 178 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 SETDB1Q15047 1291 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CGB2Q6NT52 195 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PPP1R21Q6ZMI0 780 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 SYDE1Q6ZW31 735 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 USP37Q86T82 979 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 FAM160B2Q86V87 743 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CCHCR1Q8TD31 782 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 FBF1Q8TES7 1133 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 BSNDQ8WZ55 320 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PLCD4Q9BRC7 762 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 TMEM39BQ9GZU3 492 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 FAM47DPA6NHR8 397 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 GOLGA8SH3BPF8 625 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 GOLGA8MH3BSY2 632 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 PIAS1O75925 651 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 NEBLO76041 1014 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 UNGP13051 313 aaPredicted RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 WDR4P57081 412 aaKnown RBP7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 CYP24A1Q07973 514 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 DGKZQ13574 1117 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 STAT4Q14765 748 aa7.99□□□□□ -1.13
SMARCC1-202ENST00000425518 SLC27A3Q5K4L6 730 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms