RNA–Protein interactions for RNA: ENST00000425424.3

SAPCD1-209, Transcript of suppressor APC domain containing 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SAPCD1, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAPCD1-209ENST00000425424 TUBGCP4Q9UGJ1 667 aa17.79■□□□□ 0.44
SAPCD1-209ENST00000425424 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
SAPCD1-209ENST00000425424 PCDHA11Q9Y5I1 949 aa17.79■□□□□ 0.44
SAPCD1-209ENST00000425424 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 GTPBP10A4D1E9 387 aaKnown RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 STAU1O95793 577 aaKnown RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 ATP1A3P13637 1013 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 FMO5P49326 533 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 MXI1P50539 228 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 SOX4Q06945 474 aaPredicted RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 KCNH2Q12809 1159 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 VWA3BQ502W6 1294 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 SV2AQ7L0J3 742 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 TRAPPC11Q7Z392 1133 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 TMCO2Q7Z6W1 182 aaPredicted RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 LRRC52Q8N7C0 313 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 C1orf127Q8N9H9 656 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 CLP1Q92989 425 aaKnown RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 C18orf25Q96B23 403 aaPredicted RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 FAM193BQ96PV7 902 aaPredicted RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 POP1Q99575 1024 aaKnown RBP17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 RBSNQ9H1K0 784 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 NDST4Q9H3R1 872 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 CWH43Q9H720 699 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 NRDE2Q9H7Z3 1164 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 DPP3Q9NY33 737 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 RWDD3Q9Y3V2 267 aa17.78■□□□□ 0.44
SAPCD1-209ENST00000425424 TRIP11Q15643 1979 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 PIRO00625 290 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 DDHD2O94830 711 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 LAG3P18627 525 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 PNPLA4P41247 253 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 COPB1P53618 953 aaKnown RBP17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 RAB30Q15771 203 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 UPP1Q16831 310 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 UVSSAQ2YD98 709 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 HSP90AA4PQ58FG1 418 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 PRPF38BQ5VTL8 546 aaKnown RBP17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 TDRD10Q5VZ19 366 aaKnown RBP17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 FAM117BQ6P1L5 589 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 CHRDL2Q6WN34 429 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 FIBCD1Q8N539 461 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 RNF214Q8ND24 703 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 VRTNQ9H8Y1 702 aa17.77■□□□□ 0.44
SAPCD1-209ENST00000425424 LGALS16A8MUM7 142 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 LINC00271P0C7V0 271 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 ATICP31939 592 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 GCLMP48507 274 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 RBP5P82980 135 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 SMAD3P84022 425 aaKnown RBP17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 MYL7Q01449 175 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 CETN1Q12798 172 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 CBWD6Q4V339 395 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 PAN2Q504Q3 1202 aaKnown RBP17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 CBWD3Q5JTY5 395 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 CBWD5Q5RIA9 395 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 C9orf57Q5W0N0 161 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 LMBRD2Q68DH5 695 aaPredicted RBP17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 SARM1Q6SZW1 724 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 ZNF280BQ86YH2 543 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 FBXL13Q8NEE6 735 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 TAF4BQ92750 862 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 FAXDC2Q96IV6 333 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 ZNF560Q96MR9 790 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 AAASQ9NRG9 546 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 SIX4Q9UIU6 781 aa17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 MRPL42Q9Y6G3 142 aaKnown RBP17.76■□□□□ 0.43
SAPCD1-209ENST00000425424 KIAA1671Q9BY89 1806 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 A0A1B0GTH6 734 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 B4GALT3O60512 393 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 ITGB3P05106 788 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 BIRC3Q13489 604 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 FILIP1LQ4L180 1135 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 EPC2Q52LR7 807 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 SMYD5Q6GMV2 418 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 DCLRE1AQ6PJP8 1040 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 CREBRFQ8IUR6 639 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 SAMD11Q96NU1 681 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 TAB2Q9NYJ8 693 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 DNAJB4Q9UDY4 337 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 STK39Q9UEW8 545 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 PDE4DIPQ5VU43 2346 aa17.75■□□□□ 0.43
SAPCD1-209ENST00000425424 GBF1Q92538 1859 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 PODXLO00592 558 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 ZC3H11AO75152 810 aaKnown RBP eCLIP17.74■□□□□ 0.432e-6■■■■■ 41.7
SAPCD1-209ENST00000425424 VNN1O95497 513 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 ALDH2P05091 517 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 GALTP07902 379 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 POLR2BP30876 1174 aaKnown RBP17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 PPM1AP35813 382 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 ALDH7A1P49419 539 aaKnown RBP17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 AARSP49588 968 aaKnown RBP eCLIP17.74■□□□□ 0.434e-6■■■■■ 30.6
SAPCD1-209ENST00000425424 CLCNKBP51801 687 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 BCAR1P56945 870 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 FANCCQ00597 558 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 NCOA4Q13772 614 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 FAM109BQ6ICB4 259 aaPredicted RBP17.74■□□□□ 0.43
SAPCD1-209ENST00000425424 ZNF558Q96NG5 402 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms