RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 P4HA1P13674 534 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 UCHL3P15374 230 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 ATF7P17544 494 aaPredicted RBP11.13□□□□□ -0.63
MDC1-205ENST00000425072 PAX3P23760 479 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 AKAP5P24588 427 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 CYP2C18P33260 490 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 ADKP55263 362 aaKnown RBP11.13□□□□□ -0.63
MDC1-205ENST00000425072 CCL23P55773 120 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 MYO1EQ12965 1108 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 NCOA4Q13772 614 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 MBTPS1Q14703 1052 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 ZBTB6Q15916 424 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 LRRC26Q2I0M4 334 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 JADE1Q6IE81 842 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 RRAGAQ7L523 313 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 ECHDC2Q86YB7 292 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 TMTC1Q8IUR5 882 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 OR5B17Q8NGF7 314 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 TAS1R2Q8TE23 839 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 RPS6KC1Q96S38 1066 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 APOL6Q9BWW8 343 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 NXF3Q9H4D5 531 aaKnown RBP11.13□□□□□ -0.63
MDC1-205ENST00000425072 UBE2TQ9NPD8 197 aaPredicted RBP11.13□□□□□ -0.63
MDC1-205ENST00000425072 CNTN3Q9P232 1028 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 DNAJC12Q9UKB3 198 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 ITGA11Q9UKX5 1188 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 PLAGL2Q9UPG8 496 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 HES2Q9Y543 173 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 PCDHB7Q9Y5E2 793 aa11.13□□□□□ -0.63
MDC1-205ENST00000425072 BZW2Q9Y6E2 419 aaKnown RBP11.13□□□□□ -0.63
MDC1-205ENST00000425072 DNAH12Q6ZR08 3092 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 C9IYK1 514 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 HOXA2O43364 376 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 NOL4O94818 638 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 CST3P01034 146 aaPredicted RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 PFKMP08237 780 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 KRT19P08727 400 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 TBXAS1P24557 533 aaPredicted RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 RPL9P32969 192 aaKnown RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 STAT1P42224 750 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 PIK3CAP42336 1068 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 KLK7P49862 253 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 YWHAEP62258 255 aaKnown RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 GCNT1Q02742 428 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 PTPN21Q16825 1174 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 SFMBT2Q5VUG0 894 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 TDRD10Q5VZ19 366 aaKnown RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 MFSD5Q6N075 450 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 CNKSR3Q6P9H4 555 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 UBE2Q1Q7Z7E8 422 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 RTN4RL1Q86UN2 441 aaPredicted RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 TTC39CQ8N584 583 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 TC2NQ8N9U0 490 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 DDX27Q96GQ7 796 aaKnown RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 SNX27Q96L92 541 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 HTATIP2Q9BUP3 242 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 PPP1R12CQ9BZL4 782 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 TTYH3Q9C0H2 523 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 DNAI2Q9GZS0 605 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 FAM124BQ9H5Z6 455 aaPredicted RBP11.12□□□□□ -0.63
MDC1-205ENST00000425072 RSAD1Q9HA92 442 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 TMEM161AQ9NX61 479 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 AIPL1Q9NZN9 384 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 LRFN2Q9ULH4 789 aa11.12□□□□□ -0.63
MDC1-205ENST00000425072 ANK1P16157 1881 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 ABHD14A-ACY1A0A1B0GW23 586 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 MGEA5O60502 916 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 MFAP3LO75121 409 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 STAU1O95793 577 aaKnown RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 ASS1P00966 412 aaKnown RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 FAM163BP0C2L3 166 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 ACTN1P12814 892 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 FERP16591 822 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 HNRNPH3P31942 346 aaKnown RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 PNPLA4P41247 253 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 BPIFB4P59827 614 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 CDK17Q00537 523 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 ARID5BQ14865 1188 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 GPNMBQ14956 572 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 LMBRD2Q68DH5 695 aaPredicted RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 PHLDB3Q6NSJ2 640 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 DPY19L2P1Q6NXN4 242 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 GLB1LQ6UWU2 654 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 CYP26C1Q6V0L0 522 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 AGMOQ6ZNB7 445 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 ZNF598Q86UK7 904 aaKnown RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 EFCAB13Q8IY85 973 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 PPM1KQ8N3J5 372 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 SEMA4DQ92854 862 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 SCLYQ96I15 445 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 DNAJC7Q99615 494 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 BAG1Q99933 345 aaPredicted RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 OSBPL7Q9BZF2 842 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 MTMR12Q9C0I1 747 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 SIX2Q9NPC8 291 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 NLRC4Q9NPP4 1024 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 PRDM5Q9NQX1 630 aaPredicted RBP11.11□□□□□ -0.63
MDC1-205ENST00000425072 ABHD10Q9NUJ1 306 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 KLK14Q9P0G3 267 aa11.11□□□□□ -0.63
MDC1-205ENST00000425072 AGAP1Q9UPQ3 857 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms