RNA–Protein interactions for RNA: ENST00000425056.5

GPC1-203, Transcript of glypican 1, humanhuman

TSL 5

Gene GPC1, Length 1,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-203ENST00000425056 ARHGEF3Q9NR81 526 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 ANKFY1Q9P2R3 1169 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 KCNH3Q9ULD8 1083 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 DMDP11532 3685 aa19.4■□□□□ 0.7
GPC1-203ENST00000425056 SLC26A4O43511 780 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 PLA2G4BP0C869 781 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 HARSP12081 509 aaKnown RBP19.39■□□□□ 0.69
GPC1-203ENST00000425056 ROR1Q01973 937 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 PABPC1LQ4VXU2 614 aaKnown RBP19.39■□□□□ 0.69
GPC1-203ENST00000425056 VARS2Q5ST30 1063 aaKnown RBP19.39■□□□□ 0.69
GPC1-203ENST00000425056 PHLDB3Q6NSJ2 640 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 PARM1Q6UWI2 310 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 ITFG1Q8TB96 612 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 C18orf25Q96B23 403 aaPredicted RBP19.39■□□□□ 0.69
GPC1-203ENST00000425056 AK8Q96MA6 479 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 PLIN2Q99541 437 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 HCFC1R1Q9NWW0 138 aa19.39■□□□□ 0.69
GPC1-203ENST00000425056 DNMT3BQ9UBC3 853 aaKnown RBP19.39■□□□□ 0.69
GPC1-203ENST00000425056 ARHGEF37A1IGU5 675 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 WDR27A2RRH5 827 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 PRR23AA6NEV1 266 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 TBC1D4O60343 1298 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 RFX1P22670 979 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 MCM2P49736 904 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 NCKAP1LP55160 1127 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 MCL1Q07820 350 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 ANGPT1Q15389 498 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 SLC10A6Q3KNW5 377 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 ASCL5Q7RTU5 278 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 NPAS3Q8IXF0 933 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 ST13P5Q8NFI4 369 aaPredicted RBP19.38■□□□□ 0.69
GPC1-203ENST00000425056 ZNF461Q8TAF7 563 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 RPP25Q9BUL9 199 aaKnown RBP19.38■□□□□ 0.69
GPC1-203ENST00000425056 LARSQ9P2J5 1176 aaKnown RBP19.38■□□□□ 0.69
GPC1-203ENST00000425056 ODF2LQ9ULJ1 636 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 NUB1Q9Y5A7 615 aa19.38■□□□□ 0.69
GPC1-203ENST00000425056 H0YCG3 227 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 STK25O00506 426 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 ABLIM3O94929 683 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 MRPL58Q14197 206 aaKnown RBP19.37■□□□□ 0.69
GPC1-203ENST00000425056 ARSHQ5FYA8 562 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 FRMD5Q7Z6J6 570 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 SUSD3Q96L08 255 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 UPF2Q9HAU5 1272 aaKnown RBP19.37■□□□□ 0.69
GPC1-203ENST00000425056 AVENQ9NQS1 362 aaPredicted RBP19.37■□□□□ 0.69
GPC1-203ENST00000425056 SMC3Q9UQE7 1217 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 MIA3Q5JRA6 1907 aa19.37■□□□□ 0.69
GPC1-203ENST00000425056 NPHP3-ACAD11A0A0J9YXS1 232 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 H7C4K7 107 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 CLDN3O15551 220 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 RHOP08100 348 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 CXCL8P10145 99 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 ATF2P15336 505 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 CACNB1Q02641 598 aaPredicted RBP19.36■□□□□ 0.69
GPC1-203ENST00000425056 SEZ6Q53EL9 994 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 REEP2Q9BRK0 252 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 HAPLN2Q9GZV7 340 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 DLGAP2Q9P1A6 1054 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 TUBGCP4Q9UGJ1 667 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 FBXL5Q9UKA1 691 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 RIF1Q5UIP0 2472 aaKnown RBP19.36■□□□□ 0.69
GPC1-203ENST00000425056 FAM186AA6NE01 2351 aa19.36■□□□□ 0.69
GPC1-203ENST00000425056 SCP2P22307 547 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 ELF1P32519 619 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 MCM4P33991 863 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 STARD6P59095 220 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 GPC5P78333 572 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 SLC5A9Q2M3M2 681 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 ZNF280DQ6N043 979 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 HAUS6Q7Z4H7 955 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 TCEAL8Q8IYN2 117 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 LRRC15Q8TF66 581 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 ING5Q8WYH8 240 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 NKD2Q969F2 451 aaPredicted RBP19.35■□□□□ 0.69
GPC1-203ENST00000425056 PLEKHA5Q9HAU0 1116 aa19.35■□□□□ 0.69
GPC1-203ENST00000425056 MRPS23Q9Y3D9 190 aaKnown RBP19.35■□□□□ 0.69
GPC1-203ENST00000425056 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.35■□□□□ 0.69
GPC1-203ENST00000425056 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.35■□□□□ 0.69
GPC1-203ENST00000425056 TTC26A0AVF1 554 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 PRRG1O14668 218 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 BMP15O95972 392 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 PIGRP01833 764 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 LRG1P02750 347 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 CLTAP09496 248 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 ZNF131P52739 623 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 CTXN3Q4LDR2 81 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 LARP1BQ659C4 914 aaKnown RBP19.34■□□□□ 0.69
GPC1-203ENST00000425056 TPGS2Q68CL5 300 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 BRAPQ7Z569 592 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 GPBP1Q86WP2 473 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 APPL2Q8NEU8 664 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 PJA1Q8NG27 643 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 BICD1Q96G01 975 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 CALML4Q96GE6 196 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 SHDQ96IW2 340 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 TBC1D32Q96NH3 1257 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 KXD1Q9BQD3 176 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 BLOC1S4Q9NUP1 217 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 GDE1Q9NZC3 331 aa19.34■□□□□ 0.69
GPC1-203ENST00000425056 SIT1Q9Y3P8 196 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms