RNA–Protein interactions for RNA: ENST00000424830.6

PUDP-203, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 3 BASIC

Gene PUDP, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-203ENST00000424830 ROR1Q01973 937 aa17.73■□□□□ 0.43
PUDP-203ENST00000424830 ATF7IP2Q5U623 682 aa17.73■□□□□ 0.43
PUDP-203ENST00000424830 SLC8B1Q6J4K2 584 aa17.73■□□□□ 0.43
PUDP-203ENST00000424830 IFT74Q96LB3 600 aa17.73■□□□□ 0.43
PUDP-203ENST00000424830 CORO1BQ9BR76 489 aa17.73■□□□□ 0.43
PUDP-203ENST00000424830 POLR3CQ9BUI4 534 aaPredicted RBP17.73■□□□□ 0.43
PUDP-203ENST00000424830 TOPORSQ9NS56 1045 aaPredicted RBP17.73■□□□□ 0.43
PUDP-203ENST00000424830 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
PUDP-203ENST00000424830 I3L4J1 428 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 WNT7AO00755 349 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 EDN1P05305 212 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 FDPSP14324 419 aaKnown RBP17.72■□□□□ 0.43
PUDP-203ENST00000424830 BRCC3P46736 316 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 YARSP54577 528 aaKnown RBP17.72■□□□□ 0.43
PUDP-203ENST00000424830 FZD5Q13467 585 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 GRM2Q14416 872 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 PDZD4Q76G19 769 aaPredicted RBP17.72■□□□□ 0.43
PUDP-203ENST00000424830 IRF7Q92985 503 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 KIFC3Q9BVG8 833 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 TRMT61BQ9BVS5 477 aaKnown RBP17.72■□□□□ 0.43
PUDP-203ENST00000424830 CHRDQ9H2X0 955 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 GOLGA2P5Q9HBQ8 144 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 SLC38A7Q9NVC3 462 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 CHD8Q9HCK8 2581 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 WDR27A2RRH5 827 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 H7C4K7 107 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 MICAL2O94851 1124 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 ABLIM3O94929 683 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 ATF2P15336 505 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 FCARP24071 287 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 IGFBP6P24592 240 aaPredicted RBP17.72■□□□□ 0.43
PUDP-203ENST00000424830 MCM7P33993 719 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 ARPP19P56211 112 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 FAM78AQ5JUQ0 283 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 PRSS36Q5K4E3 855 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 CYP4A22Q5TCH4 519 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 CD300LGQ6UXG3 332 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 ELMOD1Q8N336 334 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 C3orf58Q8NDZ4 430 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 CCDC94Q9BW85 323 aaPredicted RBP17.72■□□□□ 0.43
PUDP-203ENST00000424830 TMEM60Q9H2L4 133 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 CYP4F11Q9HBI6 524 aa17.72■□□□□ 0.43
PUDP-203ENST00000424830 SMIM28A0A1B0GU29 152 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 SYN3O14994 580 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 RPA1P27694 616 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 CCR3P51677 355 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 HAUS3Q68CZ6 603 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 LAIR1Q6GTX8 287 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 IQCEQ6IPM2 695 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 MAMSTRQ6ZN01 415 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 TCEAL8Q8IYN2 117 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 CELF5Q8N6W0 485 aaKnown RBP17.71■□□□□ 0.42
PUDP-203ENST00000424830 FAM3CQ92520 227 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 KIFAP3Q92845 792 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 ASB16Q96NS5 453 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 TNFSF13BQ9Y275 285 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 NUB1Q9Y5A7 615 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 INSL5Q9Y5Q6 135 aa17.71■□□□□ 0.42
PUDP-203ENST00000424830 TICRRQ7Z2Z1 1910 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 DCDC2BA2VCK2 349 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 SHISA7A6NL88 538 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 K7ERI5 159 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 PODXLO00592 558 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 TDGF1P13385 188 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 PSMC3P17980 439 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 TGM1P22735 817 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 GDI1P31150 447 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 FOSBP53539 338 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 NT5DC1Q5TFE4 455 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 TPGS2Q68CL5 300 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 POTEHQ6S545 545 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 NECAB1Q8N987 351 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 DEPDC1BQ8WUY9 529 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 SMARCD2Q92925 531 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 GTF3C6Q969F1 213 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 TCEAL4Q96EI5 215 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 PARD6AQ9NPB6 346 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 TRPV5Q9NQA5 729 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 PIAS3Q9Y6X2 628 aa17.7■□□□□ 0.42
PUDP-203ENST00000424830 OR52Z1P0C646 297 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 GRM5P41594 1212 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 SOX4Q06945 474 aaPredicted RBP17.69■□□□□ 0.42
PUDP-203ENST00000424830 SPEM2Q0P670 501 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 SAFBQ15424 915 aaKnown RBP eCLIP17.69■□□□□ 0.42
PUDP-203ENST00000424830 LPAL2Q16609 132 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 ZNF568Q3ZCX4 644 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 PRR23BQ6ZRT6 265 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 ZNF687Q8N1G0 1237 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 LEMD2Q8NC56 503 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 ZNF512Q96ME7 567 aaPredicted RBP17.69■□□□□ 0.42
PUDP-203ENST00000424830 LMAN1LQ9HAT1 526 aa17.69■□□□□ 0.42
PUDP-203ENST00000424830 ZNF334Q9HCZ1 680 aaPredicted RBP17.69■□□□□ 0.42
PUDP-203ENST00000424830 MAP1BP46821 2468 aaKnown RBP17.68■□□□□ 0.42
PUDP-203ENST00000424830 COL4A2P08572 1712 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 CITO14578 2027 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 LRP3O75074 770 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 KRT37O76014 449 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 MUTP22033 750 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 OSTNP61366 133 aa17.68■□□□□ 0.42
PUDP-203ENST00000424830 CTXN3Q4LDR2 81 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms