RNA–Protein interactions for RNA: ENST00000424393.5

TOP3B-203, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 824 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-203ENST00000424393 SSTR3P32745 418 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-203ENST00000424393 CA8P35219 290 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 GLUD2P49448 558 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 GUCY2FP51841 1108 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 DLX2Q07687 328 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-203ENST00000424393 PNOCQ13519 176 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 KCNC3Q14003 757 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 KIAA0319Q5VV43 1072 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 JADE1Q6IE81 842 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 KANK3Q6NY19 840 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 ARMCX5Q6P1M9 558 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 DCLRE1AQ6PJP8 1040 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 CD302Q8IX05 232 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 FAM212AQ96EL1 285 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 B3GALT6Q96L58 329 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 CDCA3Q99618 268 aaPredicted RBP11.88□□□□□ -0.51
TOP3B-203ENST00000424393 FAM213AQ9BRX8 229 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 AGPAT3Q9NRZ7 376 aa11.88□□□□□ -0.51
TOP3B-203ENST00000424393 UBQLN1Q9UMX0 589 aaKnown RBP11.88□□□□□ -0.51
TOP3B-203ENST00000424393 SF3B1O75533 1304 aaKnown RBP eCLIP11.87□□□□□ -0.512e-6■■■■■ 43
TOP3B-203ENST00000424393 PLXNA3P51805 1871 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 H3BQ06 376 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 EXTL3O43909 919 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 CLASP2O75122 1294 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 B3GAT3O94766 335 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 LDHAP00338 332 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 URODP06132 367 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 CYP3A5P20815 502 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 KCNA5P22460 613 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 LRPAP1P30533 357 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 BRCC3P46736 316 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 POU5F1Q01860 360 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 DSG1Q02413 1049 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 BMS1Q14692 1282 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 KCNB1Q14721 858 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 KNOP1Q1ED39 458 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 USP41Q3LFD5 358 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 RTP2Q5QGT7 225 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 EP400NLQ6ZTU2 488 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 BRSK2Q8IWQ3 736 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 EFCAB13Q8IY85 973 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 GPD1LQ8N335 351 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 ERCC4Q92889 916 aaPredicted RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 DDX27Q96GQ7 796 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 TIGD1Q96MW7 591 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 KLHL5Q96PQ7 755 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 TSPAN18Q96SJ8 248 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 ASB7Q9H672 318 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 MRPL17Q9NRX2 175 aaKnown RBP11.87□□□□□ -0.51
TOP3B-203ENST00000424393 HSPBP1Q9NZL4 362 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 CLEC1BQ9P126 229 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 XIRP2A4UGR9 3374 aa11.87□□□□□ -0.51
TOP3B-203ENST00000424393 I3L4J1 428 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 C2CD2LO14523 706 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 PPEF2O14830 753 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 KIAA0391O15091 583 aaKnown RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 CLIC2O15247 247 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 CNPP09543 421 aaKnown RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 RPL9P32969 192 aaKnown RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 LEXMQ3ZCV2 418 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 FAM171A1Q5VUB5 890 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 SPATA1Q5VX52 437 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 LLGL2Q6P1M3 1020 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 CLEC17AQ6ZS10 378 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 CBWD2Q8IUF1 395 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 NOC3LQ8WTT2 800 aaKnown RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 RIN2Q8WYP3 895 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 CCDC47Q96A33 483 aaKnown RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 CCDC34Q96HJ3 373 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 MSLNLQ96KJ4 702 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 FBXL18Q96ME1 805 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 KCTD10Q9H3F6 313 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 RXFP1Q9HBX9 757 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 RBAKQ9NYW8 714 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 BARX2Q9UMQ3 279 aaPredicted RBP11.86□□□□□ -0.51
TOP3B-203ENST00000424393 DERAQ9Y315 318 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 HCFC2Q9Y5Z7 792 aa11.86□□□□□ -0.51
TOP3B-203ENST00000424393 FSD2A1L4K1 749 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 TEX28O15482 410 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 XPOTO43592 962 aaKnown RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 GPR37L1O60883 481 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 PRPF40AO75400 957 aaKnown RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 IL18RAPO95256 599 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 FGFR3P22607 806 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 NDUFV1P49821 464 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 UBE2HP62256 183 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 SNRPFP62306 86 aaKnown RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 ELAVL2Q12926 359 aaKnown RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 TMEM132DQ14C87 1099 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 CLUL1Q15846 466 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 KIAA1841Q6NSI8 718 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 TMEM184AQ6ZMB5 413 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 CEP57Q86XR8 500 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 C12orf56Q8IXR9 622 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 ELOA2Q8IYF1 753 aaPredicted RBP11.85□□□□□ -0.51
TOP3B-203ENST00000424393 GPR65Q8IYL9 337 aa11.85□□□□□ -0.51
TOP3B-203ENST00000424393 BEST2Q8NFU1 509 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms