RNA–Protein interactions for RNA: ENST00000424225.1

TOP2B-203, Transcript of DNA topoisomerase II beta, humanhuman

TSL 1 (best)

Gene TOP2B, Length 3,525 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2B-203ENST00000424225 SGSM1Q2NKQ1 1148 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 CYP4F22Q6NT55 531 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 ZNF713Q8N859 430 aaPredicted RBP13.73□□□□□ -0.21
TOP2B-203ENST00000424225 TMEM117Q9H0C3 514 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 METTL14Q9HCE5 456 aaKnown RBP13.73□□□□□ -0.21
TOP2B-203ENST00000424225 SLC17A7Q9P2U7 560 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 RASA4BC9J798 803 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 RASA4O43374 803 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 MARCH6O60337 910 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 ECE2O60344 883 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 ACADSP16219 412 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 RXRBP28702 533 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 NRLP54845 237 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 TXNRD3NBQ6F5E7 133 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 SH3BP5LQ7L8J4 393 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 SCG3Q8WXD2 468 aaKnown RBP13.73□□□□□ -0.21
TOP2B-203ENST00000424225 ANKRD2Q9GZV1 360 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 NSRP1Q9H0G5 558 aaKnown RBP13.73□□□□□ -0.21
TOP2B-203ENST00000424225 ZNF395Q9H8N7 513 aaPredicted RBP13.73□□□□□ -0.21
TOP2B-203ENST00000424225 RABGAP1Q9Y3P9 1069 aa13.73□□□□□ -0.21
TOP2B-203ENST00000424225 IL1R1P14778 569 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 INHBCP55103 352 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 ATP11AP98196 1134 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 SLC15A2Q16348 729 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 NFIL3Q16649 462 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 MFSD14BQ5SR56 506 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 PCNX4Q63HM2 1172 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 PPP1R18Q6NYC8 613 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 SLC30A9Q6PML9 568 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 TPH2Q8IWU9 490 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 HELQQ8TDG4 1101 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 UBN1Q9NPG3 1134 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 EXOC3O60645 756 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 SGO2Q562F6 1265 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 VPS36Q86VN1 386 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 NBPF5PQ86XG9 351 aaPredicted RBP13.72□□□□□ -0.21
TOP2B-203ENST00000424225 RHOT2Q8IXI1 618 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 CLPTM1LQ96KA5 538 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 NPHS2Q9NP85 383 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 KLHL14Q9P2G3 628 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 MTRF1LQ9UGC7 380 aaKnown RBP13.72□□□□□ -0.21
TOP2B-203ENST00000424225 PASKQ96RG2 1323 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 RALAP11233 206 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 ADRA1DP25100 572 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 CMPK2Q5EBM0 449 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 ATG14Q6ZNE5 492 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 GBP7Q8N8V2 638 aaPredicted RBP13.72□□□□□ -0.21
TOP2B-203ENST00000424225 DNAJC9Q8WXX5 260 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 SNF8Q96H20 258 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 KLF6Q99612 283 aaPredicted RBP13.72□□□□□ -0.21
TOP2B-203ENST00000424225 ASIC3Q9UHC3 531 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 RASAL2Q9UJF2 1139 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 PCDHGB4Q9UN71 923 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 PCDHGB5Q9Y5G0 923 aa13.72□□□□□ -0.21
TOP2B-203ENST00000424225 WDR91A4D1P6 747 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 GOLGA8IPA6NC78 632 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 GOLGA8JA6NMD2 632 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 MIF4GDA9UHW6 222 aaKnown RBP13.71□□□□□ -0.21
TOP2B-203ENST00000424225 THAP12O43422 761 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 SMIM24O75264 130 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 PSMD10O75832 226 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 RBM5P52756 815 aaKnown RBP eCLIP13.71□□□□□ -0.21
TOP2B-203ENST00000424225 USP4Q13107 963 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 LRRC37BQ96QE4 947 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 WNT8AQ9H1J5 351 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.71□□□□□ -0.21
TOP2B-203ENST00000424225 CLUHO75153 1309 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 BRWD3Q6RI45 1802 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 FAM47DPA6NHR8 397 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 ATP9AO75110 1047 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 EEF2P13639 858 aaKnown RBP13.71□□□□□ -0.21
TOP2B-203ENST00000424225 CD1EP15812 388 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 SREBF1P36956 1147 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 LBRQ14739 615 aaKnown RBP13.71□□□□□ -0.21
TOP2B-203ENST00000424225 RCN1Q15293 331 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 SNX30Q5VWJ9 437 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 NAP1L3Q99457 506 aaPredicted RBP13.71□□□□□ -0.21
TOP2B-203ENST00000424225 PI4K2AQ9BTU6 479 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 DCTN4Q9UJW0 460 aa13.71□□□□□ -0.21
TOP2B-203ENST00000424225 GSC2O15499 205 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 ZBED4O75132 1171 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 CYP11B1P15538 503 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 NOP14P78316 857 aaKnown RBP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 PDK4Q16654 411 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 LRRC6Q86X45 466 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 ZNF75CPQ92670 426 aaPredicted RBP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 LMCD1Q9NZU5 365 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 EIF3DO15371 548 aaKnown RBP eCLIP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 HIP1RO75146 1068 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 KRT10P13645 584 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 ITIH2P19823 946 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 LACTBP83111 547 aaPredicted RBP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 MTMR2Q13614 643 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 AGGF1Q8N302 714 aaeCLIP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 UBL4BQ8N7F7 174 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 RBBP8NLQ8NC74 664 aaPredicted RBP13.7□□□□□ -0.22
TOP2B-203ENST00000424225 CPA5Q8WXQ8 436 aa13.7□□□□□ -0.22
TOP2B-203ENST00000424225 KIFAP3Q92845 792 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms