RNA–Protein interactions for RNA: ENST00000423636.6

PTPRN-204, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN, Length 3,313 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-204ENST00000423636 SMAD1Q15797 465 aaKnown RBP12.74□□□□□ -0.37
PTPRN-204ENST00000423636 AMHR2Q16671 573 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 PRAMEF19Q5SWL8 479 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 C9orf131Q5VYM1 1079 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 LBX2Q6XYB7 198 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 ZNF572Q7Z3I7 529 aaPredicted RBP12.74□□□□□ -0.37
PTPRN-204ENST00000423636 TAX1BP1Q86VP1 789 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 UBL4BQ8N7F7 174 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 RBBP8NLQ8NC74 664 aaPredicted RBP12.74□□□□□ -0.37
PTPRN-204ENST00000423636 APOL6Q9BWW8 343 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 VIPAS39Q9H9C1 493 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 ADAM22Q9P0K1 906 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 C19orf81C9J6K1 198 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 SLC26A4O43511 780 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 LYPLA2O95372 231 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 ITGBL1O95965 494 aaPredicted RBP12.74□□□□□ -0.37
PTPRN-204ENST00000423636 TUBBP07437 444 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 RALAP11233 206 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 CREB1P16220 341 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 RAB6CQ53S08 254 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 GLIS1Q8NBF1 620 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 NETO2Q8NC67 525 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 MFSD14AQ96MC6 490 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 RAB6CQ9H0N0 254 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 HES2Q9Y543 173 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 KAT6AQ92794 2004 aa12.74□□□□□ -0.37
PTPRN-204ENST00000423636 F8VP50 259 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 NDUFAB1O14561 156 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 OPA1O60313 960 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 LIG3P49916 1009 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 LAMTOR4Q0VGL1 99 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 PSPC1Q8WXF1 523 aaKnown RBP12.73□□□□□ -0.37
PTPRN-204ENST00000423636 PDLIM7Q9NR12 457 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 CALCOCO1Q9P1Z2 691 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 RBPJLQ9UBG7 517 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 HMGXB4Q9UGU5 601 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 GTF3C4Q9UKN8 822 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 RRP15Q9Y3B9 282 aaKnown RBP12.73□□□□□ -0.37
PTPRN-204ENST00000423636 UBE4BO95155 1302 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 MROH7Q68CQ1 1323 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 ZNFX1Q9P2E3 1918 aaKnown RBP12.73□□□□□ -0.37
PTPRN-204ENST00000423636 GOLGA6L10A6NI86 522 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 EXTL3O43909 919 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 BANF1O75531 89 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 CHKAP35790 457 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 PEX5P50542 639 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 LONRF1Q17RB8 773 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 SGO2Q562F6 1265 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 THOC1Q96FV9 657 aaKnown RBP12.73□□□□□ -0.37
PTPRN-204ENST00000423636 ZWILCHQ9H900 591 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 PCSK1NQ9UHG2 260 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 GOLGA6L10A0A0M3HER8 536 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 IFNB1P01574 187 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 C4BPAP04003 597 aaKnown RBP12.73□□□□□ -0.37
PTPRN-204ENST00000423636 MYZAPP0CAP1 466 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 GPC3P51654 580 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 ACAD10Q6JQN1 1059 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 EFCAB12Q6NXP0 572 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 TMC3Q7Z5M5 1100 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 GPC2Q8N158 579 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 MCEEQ96PE7 176 aa12.73□□□□□ -0.37
PTPRN-204ENST00000423636 FAM49AQ9H0Q0 323 aaPredicted RBP12.73□□□□□ -0.37
PTPRN-204ENST00000423636 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 F5H423 210 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 HCRTO43612 131 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 PLCB3Q01970 1234 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 PPFIA1Q13136 1202 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 PLCB4Q15147 1175 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 WDR72Q3MJ13 1102 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 GLRA4Q5JXX5 417 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 MCOLN2Q8IZK6 566 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 SAMD3Q8N6K7 520 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 TFAP2BQ92481 460 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 CAVIN3Q969G5 261 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 CDCA5Q96FF9 252 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 IWS1Q96ST2 819 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 ERP44Q9BS26 406 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 RNF14Q9UBS8 474 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 MRPL42Q9Y6G3 142 aaKnown RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 NCANO14594 1321 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 MYPNQ86TC9 1320 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 TLR3O15455 904 aaKnown RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 CUL2Q13617 745 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 CLEC16AQ2KHT3 1053 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 ZACNQ401N2 412 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 GLE1Q53GS7 698 aaKnown RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 GSTA5Q7RTV2 222 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 SLC13A5Q86YT5 568 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 RHOT2Q8IXI1 618 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 C9orf72Q96LT7 481 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 DHX33Q9H6R0 707 aaKnown RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 ADAMTS5Q9UNA0 930 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 AKT3Q9Y243 479 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 MAFBQ9Y5Q3 323 aaPredicted RBP12.72□□□□□ -0.37
PTPRN-204ENST00000423636 MYO1CO00159 1063 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 PRKCBP05771 671 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 MUTP22033 750 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 ADCYAP1R1P41586 468 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 KCTD2Q14681 263 aa12.72□□□□□ -0.37
PTPRN-204ENST00000423636 ZNF568Q3ZCX4 644 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms