RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 TMC5Q6UXY8 1006 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 TRIM50Q86XT4 487 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 RASGRP3Q8IV61 690 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 VPS52Q8N1B4 723 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 ARHGAP45Q92619 1136 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 REXO5Q96IC2 774 aaKnown RBP3.8□□□□□ -1.8
TOP2A-201ENST00000423485 REPIN1Q9BWE0 567 aaKnown RBP3.8□□□□□ -1.8
TOP2A-201ENST00000423485 PRRG4Q9BZD6 226 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 TMEM117Q9H0C3 514 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 CCDC68Q9H2F9 335 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 DEF6Q9H4E7 631 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 MMRN2Q9H8L6 949 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 LMAN1LQ9HAT1 526 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 IFT122Q9HBG6 1241 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 SEC31BQ9NQW1 1179 aa3.8□□□□□ -1.8
TOP2A-201ENST00000423485 COL7A1Q02388 2944 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ARFGEF1Q9Y6D6 1849 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 NEDD8-MDP1E9PL57 170 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 GIPC1O14908 333 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 RASSF9O75901 435 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 KLK3P07288 261 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 PCP11498 1178 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 POLR2EP19388 210 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 HALP42357 657 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CDH18Q13634 790 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 TOMM20Q15388 145 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 KIAA1755Q5JYT7 1200 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 FAXCQ5TGI0 409 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 C19orf48Q6RUI8 117 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CCDC81Q6ZN84 652 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CATSPER3Q86XQ3 398 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 P3H2Q8IVL5 708 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 TPH2Q8IWU9 490 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 AVL9Q8NBF6 648 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 MNS1Q8NEH6 495 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 WDR48Q8TAF3 677 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 FAM3CQ92520 227 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 LRIG1Q96JA1 1093 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 BHMT2Q9H2M3 363 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CHST12Q9NRB3 414 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ADAMTS5Q9UNA0 930 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 DDX60LQ5H9U9 1706 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 A0A1W2PQ45 241 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 A0A1W2PQY0 241 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ATXN7O15265 892 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 RNF113AO15541 343 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 WEE1P30291 646 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 RHDQ02161 417 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 EVX2Q03828 476 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ACTN3Q08043 901 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 MTMR1Q13613 665 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CUL1Q13616 776 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CCDC6Q16204 474 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 LONRF1Q17RB8 773 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 NUGGCQ68CJ6 796 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SERPINA13PQ6UXR4 307 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 MAEAQ7L5Y9 396 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 DEPDC4Q8N2C3 294 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 PABPC5Q96DU9 382 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 STAMBPL1Q96FJ0 436 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CNDP1Q96KN2 507 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CENPKQ9BS16 269 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 GDF3Q9NR23 364 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ALKBH4Q9NXW9 302 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SMG5Q9UPR3 1016 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SMC3Q9UQE7 1217 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 MYH7BA7E2Y1 1941 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ADAMTSL1Q8N6G6 1762 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 DCDC2BA2VCK2 349 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 S100BP04271 92 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SRP14P37108 136 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ELK3P41970 407 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 DNM1Q05193 864 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 TFCP2Q12800 502 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SCIMPQ6UWF3 145 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 GPR135Q8IZ08 494 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CLYBLQ8N0X4 340 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 TEX29Q8N6K0 151 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 OR10Q1Q8NGQ4 319 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 UBXN4Q92575 508 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 MRPL38Q96DV4 380 aaKnown RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 UROC1Q96N76 676 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 BRD8Q9H0E9 1235 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 CAMSAP3Q9P1Y5 1249 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 PADI2Q9Y2J8 665 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 IQCJ-SCHIP1C9J366 451 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 INPPL1O15357 1258 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ATP8B1O43520 1251 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 DFNA5O60443 496 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 PGK2P07205 417 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ZNF24P17028 368 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 HOXA7P31268 230 aaPredicted RBP3.79□□□□□ -1.8
TOP2A-201ENST00000423485 KRT40Q6A162 431 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 ERAP2Q6P179 960 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 TP53INP2Q8IXH6 220 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 GRIN3AQ8TCU5 1115 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 MCRS1Q96EZ8 462 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 DCUN1D1Q96GG9 259 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SPATA16Q9BXB7 569 aa3.79□□□□□ -1.8
TOP2A-201ENST00000423485 SLC13A1Q9BZW2 595 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms