RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 NOLC1Q14978 699 aaKnown RBP eCLIP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 MLF2Q15773 248 aaPredicted RBP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 VARS2Q5ST30 1063 aaKnown RBP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 RSPO2Q6UXX9 243 aaPredicted RBP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 TAS1R3Q7RTX0 852 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 CDK5RAP3Q96JB5 506 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 RPP25Q9BUL9 199 aaKnown RBP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 CNTN3Q9P232 1028 aa17.67■□□□□ 0.42
COL18A1-205ENST00000423214 DNMT3BQ9UBC3 853 aaKnown RBP17.67■□□□□ 0.42
COL18A1-205ENST00000423214 EP300Q09472 2414 aaPredicted RBP17.66■□□□□ 0.42
COL18A1-205ENST00000423214 H7C4K7 107 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 SYN3O14994 580 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 RHOP08100 348 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 PROZP22891 400 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 IGFBP6P24592 240 aaPredicted RBP17.66■□□□□ 0.42
COL18A1-205ENST00000423214 GUCY2CP25092 1073 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 MCM4P33991 863 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 MATR3P43243 847 aaKnown RBP eCLIP17.66■□□□□ 0.42
COL18A1-205ENST00000423214 SMTNP53814 917 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 RAD51AP2Q09MP3 1159 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 SNW1Q13573 536 aaKnown RBP17.66■□□□□ 0.42
COL18A1-205ENST00000423214 RILPL1Q5EBL4 403 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 XKR4Q5GH76 650 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 SLC8B1Q6J4K2 584 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 CD300LGQ6UXG3 332 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 ALKAL1Q6UXT8 129 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 C1orf186Q6ZWK4 172 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 KCNK18Q7Z418 384 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 SEMA4AQ9H3S1 761 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 R4GN57 208 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 NUP210Q8TEM1 1887 aaPredicted RBP17.66■□□□□ 0.42
COL18A1-205ENST00000423214 COL4A2P08572 1712 aa17.66■□□□□ 0.42
COL18A1-205ENST00000423214 KANSL1LA0AUZ9 987 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 WDR27A2RRH5 827 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 KCNE1P15382 129 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 STARD6P59095 220 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 PRKCQQ04759 706 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 UBXN2BQ14CS0 331 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 ZNF280DQ6N043 979 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 ELMOD1Q8N336 334 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 ZNF461Q8TAF7 563 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 C18orf25Q96B23 403 aaPredicted RBP17.65■□□□□ 0.42
COL18A1-205ENST00000423214 BICD1Q96G01 975 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 ZMAT2Q96NC0 199 aaKnown RBP17.65■□□□□ 0.42
COL18A1-205ENST00000423214 MMTAG2Q9BU76 263 aaKnown RBP17.65■□□□□ 0.42
COL18A1-205ENST00000423214 CYP4F11Q9HBI6 524 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 DLGAP2Q9P1A6 1054 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 KCNG1Q9UIX4 513 aa17.65■□□□□ 0.42
COL18A1-205ENST00000423214 ZNF292O60281 2723 aa17.64■□□□□ 0.42
COL18A1-205ENST00000423214 ARHGEF37A1IGU5 675 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 SFI1A8K8P3 1242 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 H3BQV1 296 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 ABLIM1O14639 778 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 TOM1L1O75674 476 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 LMNAP02545 664 aaKnown RBP17.64■□□□□ 0.41
COL18A1-205ENST00000423214 PLS3P13797 630 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 RPL9P32969 192 aaKnown RBP17.64■□□□□ 0.41
COL18A1-205ENST00000423214 ATP2C1P98194 919 aaPredicted RBP17.64■□□□□ 0.41
COL18A1-205ENST00000423214 IL17AQ16552 155 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 SLC5A9Q2M3M2 681 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 CTXN3Q4LDR2 81 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 C1orf210Q8IVY1 113 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 SPIRE2Q8WWL2 714 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 MCRS1Q96EZ8 462 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 HINFPQ9BQA5 517 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 CORO1BQ9BR76 489 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 BCO2Q9BYV7 579 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 GDE1Q9NZC3 331 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 INSL5Q9Y5Q6 135 aa17.64■□□□□ 0.41
COL18A1-205ENST00000423214 ZNF638Q14966 1978 aaKnown RBP17.64■□□□□ 0.41
COL18A1-205ENST00000423214 WDR87Q6ZQQ6 2873 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 VWA3AA6NCI4 1184 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 SP9P0CG40 484 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 CPB1P15086 417 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 ATF2P15336 505 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 CEBPBP17676 345 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 PTPN2P17706 415 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 RABEP1Q15276 862 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 SLC44A4Q53GD3 710 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 HYIQ5T013 277 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 PDZD4Q76G19 769 aaPredicted RBP17.63■□□□□ 0.41
COL18A1-205ENST00000423214 KCTD17Q8N5Z5 321 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 APPL2Q8NEU8 664 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 ZBTB45Q96K62 511 aaPredicted RBP17.63■□□□□ 0.41
COL18A1-205ENST00000423214 SUSD3Q96L08 255 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 PLIN2Q99541 437 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 AVENQ9NQS1 362 aaPredicted RBP17.63■□□□□ 0.41
COL18A1-205ENST00000423214 KCND2Q9NZV8 630 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 FBXL5Q9UKA1 691 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 OTOGLQ3ZCN5 2332 aa17.63■□□□□ 0.41
COL18A1-205ENST00000423214 H0YCG3 227 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 ZNF197O14709 1029 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 CLDN3O15551 220 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 LRRN2O75325 713 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 ECI2O75521 394 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 ABLIM3O94929 683 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 CXCL8P10145 99 aa17.62■□□□□ 0.41
COL18A1-205ENST00000423214 MAPTP10636 758 aaKnown RBP17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms