RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 LENG9Q96B70 501 aa10.36□□□□□ -0.75
CMSS1-201ENST00000421999 HPDLQ96IR7 371 aa10.36□□□□□ -0.75
CMSS1-201ENST00000421999 COLEC11Q9BWP8 271 aa10.36□□□□□ -0.75
CMSS1-201ENST00000421999 CACNA1SQ13698 1873 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 COL4A1P02462 1669 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 TLR2O60603 784 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 APOEP02649 317 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 FTLP02792 175 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 GUCY2FP51841 1108 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 CCL23P55773 120 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ABHD15Q6UXT9 468 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 PDCD6IPQ8WUM4 868 aaKnown RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 CCT6BQ92526 530 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ZBTB45Q96K62 511 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 BCAS3Q9H6U6 928 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ABI2Q9NYB9 513 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 DONSONQ9NYP3 566 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 MYH7P12883 1935 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 BCORQ6W2J9 1755 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 USP27XA6NNY8 438 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ATP2C2O75185 946 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 RPLP2P05387 115 aaKnown RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 GJB1P08034 283 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 RALAP11233 206 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ATF2P15336 505 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 NNMTP40261 264 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 TAF6P49848 677 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 BASP1P80723 227 aaKnown RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 SV2CQ496J9 727 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 CFAP157Q5JU67 520 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 LDLRAD1Q5T700 205 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 IFNL1Q8IU54 200 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ARFGAP2Q8N6H7 521 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 GDAP1Q8TB36 358 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 MAML3Q96JK9 1138 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 N4BP2Q86UW6 1770 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 AOC2O75106 756 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 ZRANB2O95218 330 aaKnown RBP eCLIP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 HMBSP08397 361 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 PNMA6AP0CW24 399 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 BTG3Q14201 252 aaPredicted RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 DCAF4L1Q3SXM0 396 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 HEY1Q9Y5J3 304 aa10.35□□□□□ -0.75
CMSS1-201ENST00000421999 KIAA0100Q14667 2235 aaKnown RBP10.35□□□□□ -0.75
CMSS1-201ENST00000421999 NEMP1O14524 444 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 HOXA2O43364 376 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ZBED1O96006 694 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 POMCP01189 267 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 SOX5P35711 763 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 SNRPFP62306 86 aaKnown RBP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 GPC5P78333 572 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ACCSLQ4AC99 568 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 C10orf76Q5T2E6 689 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 TAOK1Q7L7X3 1001 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 DCP1BQ8IZD4 617 aaKnown RBP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 LENG1Q96BZ8 264 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 NT5C1AQ9BXI3 368 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 TRIM7Q9C029 511 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ASNSD1Q9NWL6 643 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ANAPC5Q9UJX4 755 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ADGRG1Q9Y653 693 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 THP07101 528 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ATXN8OSP0DMR3 200 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 YWHAGP61981 247 aaKnown RBP eCLIP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 DUSP28Q4G0W2 176 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 HYIQ5T013 277 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ARHGEF18Q6ZSZ5 1173 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 RAB3IL1Q8TBN0 382 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ASAP3Q8TDY4 903 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 SPIRE2Q8WWL2 714 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ERGIC2Q96RQ1 377 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 GPR20Q99678 358 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 EDEM3Q9BZQ6 932 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 KCNF1Q9H3M0 494 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 TMEM8AQ9HCN3 771 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 TRAF3IP3Q9Y228 551 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 DYNC1I1O14576 645 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 SART1O43290 800 aaKnown RBP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 CA12O43570 354 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 SH3BP5O60239 455 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 MPZL3Q6UWV2 235 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 RBBP8NLQ8NC74 664 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 PPM1EQ8WY54 764 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 RPGRIP1Q96KN7 1286 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 IKZF4Q9H2S9 585 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 MORC2Q9Y6X9 1032 aaPredicted RBP10.34□□□□□ -0.75
CMSS1-201ENST00000421999 PFDN6O15212 129 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ZNF862O60290 1169 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 GARTP22102 1010 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 GLRA2P23416 452 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 ALDH1A3P47895 512 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 KRT71Q3SY84 523 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 TSC1Q92574 1164 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 C18orf8Q96DM3 657 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 HEMGNQ9BXL5 484 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 STK33Q9BYT3 514 aa10.34□□□□□ -0.75
CMSS1-201ENST00000421999 COL2A1P02458 1487 aaPredicted RBP10.33□□□□□ -0.76
CMSS1-201ENST00000421999 CCDC66A2RUB6 948 aa10.33□□□□□ -0.76
CMSS1-201ENST00000421999 CASTOR2A6NHX0 329 aa10.33□□□□□ -0.76
CMSS1-201ENST00000421999 TBKBP1A7MCY6 615 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms