RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 MYZAPP0CAP1 466 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 TNFRSF8P28908 595 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ECHS1P30084 290 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ARL2P36404 184 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 RWDD2BP57060 319 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 PTENP60484 403 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 LAMTOR4Q0VGL1 99 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 TRPC3Q13507 836 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 CUL2Q13617 745 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 KRT71Q3SY84 523 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 SH3D19Q5HYK7 790 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 PRELID2Q8N945 189 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 RBBP8NLQ8NC74 664 aaPredicted RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 BCAS4Q8TDM0 211 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 ATP8B4Q8TF62 1192 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 DDX1Q92499 740 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 SCLT1Q96NL6 688 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 RAB17Q9H0T7 212 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 KIAA1586Q9HCI6 787 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 CWC15Q9P013 229 aaKnown RBP11.7□□□□□ -0.54
DDX56-203ENST00000421223 PCDHB2Q9Y5E7 798 aa11.7□□□□□ -0.54
DDX56-203ENST00000421223 PHIPQ8WWQ0 1821 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 O00370 1275 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 B4GALT5O43286 388 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 ADCY3O60266 1144 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 IRAK1P51617 712 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 MYL6P60660 151 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 KAZNQ674X7 775 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 METTL7BQ6UX53 244 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 ERO1BQ86YB8 467 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 ANKRD13AQ8IZ07 590 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 FBXO25Q8TCJ0 367 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 CDCA5Q96FF9 252 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 CCDC114Q96M63 670 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 ERP44Q9BS26 406 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 RBPJLQ9UBG7 517 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 MTUS1Q9ULD2 1270 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 PRKCBP05771 671 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 RARAP10276 462 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 CD19P15391 556 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 GTF2H1P32780 548 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 CCT5P48643 541 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 IRX5P78411 483 aaPredicted RBP11.69□□□□□ -0.54
DDX56-203ENST00000421223 GCNT1Q02742 428 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 UAP1Q16222 522 aaPredicted RBP11.69□□□□□ -0.54
DDX56-203ENST00000421223 MAPK6Q16659 721 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 TTC27Q6P3X3 843 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 MCOLN2Q8IZK6 566 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 WNT8AQ9H1J5 351 aa11.69□□□□□ -0.54
DDX56-203ENST00000421223 A0A0B4J269 797 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 PI4K2BG5E9Z4 385 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 GRIN3BO60391 1043 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 POTEJP0CG39 1038 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 ICAM3P32942 547 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 RTP1P59025 263 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 SGO2Q562F6 1265 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 C11orf63Q6NUN7 778 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 SLC13A5Q86YT5 568 aaPredicted RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 ZBTB8OSQ8IWT0 167 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 ACSF2Q96CM8 615 aaPredicted RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 LRRC4CQ9HCJ2 640 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 FAM114A2Q9NRY5 505 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 ASIC3Q9UHC3 531 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 RASAL2Q9UJF2 1139 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 ATG7O95352 703 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 LDHAP00338 332 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 CYP1A2P05177 515 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 TMEM191BP0C7N4 346 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 NR1D1P20393 614 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 SLCO1A2P46721 670 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 PEX5P50542 639 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 EFCAB12Q6NXP0 572 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 RNF25Q96BH1 459 aaPredicted RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 MRPL4Q9BYD3 311 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 CCDC113Q9H0I3 377 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 NOVA2Q9UNW9 492 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 MYPNQ86TC9 1320 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 HSPA9P38646 679 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 ZNF568Q3ZCX4 644 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 CCDC125Q86Z20 511 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 RPS6KC1Q96S38 1066 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 SH3GL2Q99962 352 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 NIFKQ9BYG3 293 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 PPANQ9NQ55 473 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 UVRAGQ9P2Y5 699 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 LCMT1Q9UIC8 334 aa11.68□□□□□ -0.54
DDX56-203ENST00000421223 DIS3Q9Y2L1 958 aaKnown RBP11.68□□□□□ -0.54
DDX56-203ENST00000421223 DOCK1Q14185 1865 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 PHF2O75151 1096 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 MAFO75444 373 aaPredicted RBP11.67□□□□□ -0.54
DDX56-203ENST00000421223 FGFR4P22455 802 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 RFC5P40937 340 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 RPL21P46778 160 aaKnown RBP11.67□□□□□ -0.54
DDX56-203ENST00000421223 BPIFB4P59827 614 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 ATP13A4Q4VNC1 1196 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 LIN9Q5TKA1 542 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 EEF1DP3Q658K8 133 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 DPY19L2Q6NUT2 758 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 ENOSF1Q7L5Y1 443 aa11.67□□□□□ -0.54
DDX56-203ENST00000421223 MPHOSPH6Q99547 160 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms