RNA–Protein interactions for RNA: ENST00000420567.7

VAT1-202, Transcript of vesicle amine transport 1, humanhuman

TSL 2 BASIC

Gene VAT1, Length 1,069 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-202ENST00000420567 COL25A1Q9BXS0 654 aaPredicted RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 CHMP5Q9NZZ3 219 aa17.24■□□□□ 0.35
VAT1-202ENST00000420567 UBQLN1Q9UMX0 589 aaKnown RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 SPTBN5Q9NRC6 3674 aaKnown RBP17.24■□□□□ 0.35
VAT1-202ENST00000420567 UBE4BO95155 1302 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 RPN1P04843 607 aaKnown RBP17.23■□□□□ 0.35
VAT1-202ENST00000420567 ADRB2P07550 413 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 ELAVL2Q12926 359 aaKnown RBP17.23■□□□□ 0.35
VAT1-202ENST00000420567 STK4Q13043 487 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 ANKRD54Q6NXT1 300 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 GLYCTKQ8IVS8 523 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 CD302Q8IX05 232 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 KIAA0895Q8NCT3 520 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 CASP10Q92851 521 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 TTPALQ9BTX7 342 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 SSX2IPQ9Y2D8 614 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 NUB1Q9Y5A7 615 aa17.23■□□□□ 0.35
VAT1-202ENST00000420567 GRXCR2A6NFK2 248 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 MBTPS2O43462 519 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 MYL1P05976 194 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 TKTP29401 623 aaKnown RBP17.22■□□□□ 0.35
VAT1-202ENST00000420567 RPL9P32969 192 aaKnown RBP17.22■□□□□ 0.35
VAT1-202ENST00000420567 WNT7BP56706 349 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 DPYDQ12882 1025 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 SMAD4Q13485 552 aaKnown RBP17.22■□□□□ 0.35
VAT1-202ENST00000420567 TMEM132DQ14C87 1099 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 ZBTB6Q15916 424 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 TMEM184AQ6ZMB5 413 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.22■□□□□ 0.35
VAT1-202ENST00000420567 BRSK2Q8IWQ3 736 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 FMR1NBQ8N0W7 255 aaPredicted RBP17.22■□□□□ 0.35
VAT1-202ENST00000420567 SLC22A17Q8WUG5 538 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 RXFP1Q9HBX9 757 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 AGPAT3Q9NRZ7 376 aa17.22■□□□□ 0.35
VAT1-202ENST00000420567 PPEF2O14830 753 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 TGFB1I1O43294 461 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 XPOTO43592 962 aaKnown RBP17.21■□□□□ 0.35
VAT1-202ENST00000420567 EXTL3O43909 919 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 LDHAP00338 332 aaKnown RBP17.21■□□□□ 0.35
VAT1-202ENST00000420567 ADH1AP07327 375 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 CYP3A5P20815 502 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 FGFR3P22607 806 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 LRPAP1P30533 357 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 MCM4P33991 863 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 CLCN4P51793 760 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 PSMD5Q16401 504 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 BMT2Q1RMZ1 405 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 PUS10Q3MIT2 529 aaKnown RBP17.21■□□□□ 0.35
VAT1-202ENST00000420567 SYCE2Q6PIF2 218 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 EFCAB13Q8IY85 973 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 SMRP1Q8NCR6 262 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 BEST2Q8NFU1 509 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 UHRF1Q96T88 793 aaPredicted RBP17.21■□□□□ 0.35
VAT1-202ENST00000420567 ASB7Q9H672 318 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.21■□□□□ 0.35
VAT1-202ENST00000420567 RBAKQ9NYW8 714 aaPredicted RBP17.21■□□□□ 0.35
VAT1-202ENST00000420567 HSPBP1Q9NZL4 362 aa17.21■□□□□ 0.35
VAT1-202ENST00000420567 REV3LO60673 3130 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 CLIC2O15247 247 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 TRAPPC3O43617 180 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 GADD45BO75293 160 aaPredicted RBP17.2■□□□□ 0.34
VAT1-202ENST00000420567 CYP2J2P51589 502 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 FAM160A1Q05DH4 1040 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 PSMD2Q13200 908 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 SNW1Q13573 536 aaKnown RBP17.2■□□□□ 0.34
VAT1-202ENST00000420567 SPATA1Q5VX52 437 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 PPFIBP1Q86W92 1011 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 PALB2Q86YC2 1186 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 C12orf76Q8N812 135 aaPredicted RBP17.2■□□□□ 0.34
VAT1-202ENST00000420567 ENGASEQ8NFI3 743 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 LNX1Q8TBB1 728 aaPredicted RBP17.2■□□□□ 0.34
VAT1-202ENST00000420567 PIK3R5Q8WYR1 880 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 FAM84AQ96KN4 292 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 TSPAN18Q96SJ8 248 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 CDH22Q9UJ99 828 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 DERAQ9Y315 318 aa17.2■□□□□ 0.34
VAT1-202ENST00000420567 USP15Q9Y4E8 981 aaPredicted RBP17.2■□□□□ 0.34
VAT1-202ENST00000420567 MYO7AQ13402 2215 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 SPDYE4A6NLX3 237 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 DLL1O00548 723 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 IL18RAPO95256 599 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 GLUD1P00367 558 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 SPATA31D3P0C874 917 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 POU5F1Q01860 360 aaKnown RBP17.19■□□□□ 0.34
VAT1-202ENST00000420567 CREMQ03060 361 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 PNOCQ13519 176 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 KNOP1Q1ED39 458 aaKnown RBP17.19■□□□□ 0.34
VAT1-202ENST00000420567 KANK3Q6NY19 840 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 SPATA31D4Q6ZUB0 917 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 HS2ST1Q7LGA3 356 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 CBWD2Q8IUF1 395 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 CCDC47Q96A33 483 aaKnown RBP17.19■□□□□ 0.34
VAT1-202ENST00000420567 CCDC34Q96HJ3 373 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 FBXL18Q96ME1 805 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 S1PR5Q9H228 398 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 MAN1C1Q9NR34 630 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 DZANK1Q9NVP4 752 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 FNIP2Q9P278 1114 aa17.19■□□□□ 0.34
VAT1-202ENST00000420567 FAM50BQ9Y247 325 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms