RNA–Protein interactions for RNA: ENST00000420455.5

TMEM50B-201, Transcript of transmembrane protein 50B, humanhuman

TSL 1 (best)

Gene TMEM50B, Length 3,062 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM50B-201ENST00000420455 VRTNQ9H8Y1 702 aa14.4□□□□□ -0.1
TMEM50B-201ENST00000420455 RPF1Q9H9Y2 349 aaKnown RBP14.4□□□□□ -0.1
TMEM50B-201ENST00000420455 CSDE1O75534 798 aaKnown RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 C6orf222P0C671 652 aaPredicted RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 PRLRP16471 622 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 HOXD10P28358 340 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 CCND3P30281 292 aaPredicted RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 ZNF132P52740 706 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 ZNF200P98182 395 aaPredicted RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 TAF2Q6P1X5 1199 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 GLYCTKQ8IVS8 523 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 CD302Q8IX05 232 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 TAF4BQ92750 862 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 PARD6BQ9BYG5 372 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 SAGE1Q9NXZ1 904 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 FAM53CQ9NYF3 392 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 JRKLQ9Y4A0 524 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 NUB1Q9Y5A7 615 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 ZRANB2O95218 330 aaKnown RBP eCLIP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 HMGCRP04035 888 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 HARSP12081 509 aaKnown RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 GZMAP12544 262 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 EIF4BP23588 611 aaKnown RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 VEGFBP49765 207 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 GNASQ5JWF2 1037 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 ALKAL1Q6UXT8 129 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 ZNF677Q86XU0 584 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 THNSL1Q8IYQ7 743 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 C7orf31Q8N865 590 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 ZNF784Q8NCA9 323 aaPredicted RBP14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 SLC20A1Q8WUM9 679 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 DNAJB3Q8WWF6 145 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 PNKPQ96T60 521 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 MTMR12Q9C0I1 747 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 SNX12Q9UMY4 172 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 DERAQ9Y315 318 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 MROH7Q68CQ1 1323 aa14.39□□□□□ -0.11
TMEM50B-201ENST00000420455 LACTBL1A8MY62 500 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 BUB1O43683 1085 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 STAU1O95793 577 aaKnown RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 TMEM253P0C7T8 217 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CXCL8P10145 99 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CYP11B1P15538 503 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 HADHBP55084 474 aaKnown RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 SNX17Q15036 470 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 SGSM1Q2NKQ1 1148 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 SLC47A2Q86VL8 602 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CREG2Q8IUH2 290 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 TLR10Q9BXR5 811 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 PLEKHA5Q9HAU0 1116 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 C2CD2Q9Y426 696 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CYP26A1O43174 497 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 TACC1O75410 805 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 ERLIN2O94905 339 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 RPLP2P05387 115 aaKnown RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 PRKAR2AP13861 404 aaKnown RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 NOP14P78316 857 aaKnown RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 FMO1Q01740 532 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CDR2Q01850 454 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 SLC27A1Q6PCB7 646 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CDR2LQ86X02 465 aaPredicted RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 MSANTD4Q8NCY6 345 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 COG1Q8WTW3 980 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 TMEM40Q8WWA1 233 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 NOX5Q96PH1 765 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 PPP1R16BQ96T49 567 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 SPC25Q9HBM1 224 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 NCK2O43639 380 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 BIRC3Q13489 604 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 NBPF20Q3BBV1 942 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 PALB2Q86YC2 1186 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CD99L2Q8TCZ2 262 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CALR3Q96L12 384 aaKnown RBP14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 PCDHB18PQ96TA0 734 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 XPNPEP3Q9NQH7 507 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 SIX4Q9UIU6 781 aa14.38□□□□□ -0.11
TMEM50B-201ENST00000420455 CITO14578 2027 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 PGK1P00558 417 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 H2AFZP0C0S5 128 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 TNFAIP3P21580 790 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 XKR4Q5GH76 650 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 SPOPLQ6IQ16 392 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 H2AFVQ71UI9 128 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 APBB1IPQ7Z5R6 666 aaPredicted RBP14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 SLFN11Q7Z7L1 901 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 SERINC5Q86VE9 423 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 LRRC57Q8N9N7 239 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 ANKRD36BP1Q96IX9 119 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 TSPAN18Q96SJ8 248 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 FAM49AQ9H0Q0 323 aaPredicted RBP14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 FAM124BQ9H5Z6 455 aaPredicted RBP14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 GRIN2DO15399 1336 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 TRPA1O75762 1119 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 MGAT3Q09327 533 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 ZBTB6Q15916 424 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 NOTUMQ6P988 496 aa14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 RPUSD2Q8IZ73 545 aaKnown RBP14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 U2AF1L4Q8WU68 220 aaKnown RBP14.37□□□□□ -0.11
TMEM50B-201ENST00000420455 CAPZA3Q96KX2 299 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms