RNA–Protein interactions for RNA: ENST00000420166.5

HMGXB4-203, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 1,257 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-203ENST00000420166 DCLRE1AQ6PJP8 1040 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 TMC7Q7Z402 723 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 NT5DC4Q86YG4 428 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 TMEM130Q8N3G9 435 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 RDH13Q8NBN7 331 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 C3orf58Q8NDZ4 430 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 MAFAQ8NHW3 353 aaPredicted RBP22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 TCF25Q9BQ70 676 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 HERC2P3Q9BVR0 1158 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 GPR62Q9BZJ7 368 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 NSUN3Q9H649 340 aaKnown RBP22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 ENTPD7Q9NQZ7 604 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 PCDHGC5Q9Y5F6 944 aa22.37■■□□□ 1.17
HMGXB4-203ENST00000420166 SF3B1O75533 1304 aaKnown RBP eCLIP22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 VWA8A3KMH1 1905 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 PSMA7O14818 248 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 SOD2P04179 222 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 CD44P16070 742 aaKnown RBP22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 CYP24A1Q07973 514 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 SURF1Q15526 300 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 EDRF1Q3B7T1 1238 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 PLPP4Q5VZY2 271 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 CD300LGQ6UXG3 332 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 MICAL1Q8TDZ2 1067 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 NGRNQ9NPE2 291 aaKnown RBP22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 SCN1AP35498 2009 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 BRWD1Q9NSI6 2320 aa22.36■■□□□ 1.17
HMGXB4-203ENST00000420166 TULP1O00294 542 aaPredicted RBP22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 CTSAP10619 480 aa22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 NR2F2P24468 414 aa22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 IGFBP6P24592 240 aaPredicted RBP22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 SMC1AQ14683 1233 aaKnown RBP22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 PSMD6Q15008 389 aa22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 TCEAL5Q5H9L2 206 aa22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 TAS1R1Q7RTX1 841 aa22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 DHTKD1Q96HY7 919 aaPredicted RBP22.35■■□□□ 1.17
HMGXB4-203ENST00000420166 PPP1R3GB7ZBB8 358 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 CCNE1P24864 410 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 RPL13P26373 211 aaKnown RBP22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 CASP4P49662 377 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 TFAMQ00059 246 aaKnown RBP22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 ELAVL2Q12926 359 aaKnown RBP22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 BMS1Q14692 1282 aaKnown RBP22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 CCDC85BQ15834 202 aaPredicted RBP22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 CEP135Q66GS9 1140 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 CACTINQ8WUQ7 758 aaKnown RBP22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 MFSD14AQ96MC6 490 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 TSG101Q99816 390 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 DPP3Q9NY33 737 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 FRMD4BQ9Y2L6 1034 aa22.34■■□□□ 1.17
HMGXB4-203ENST00000420166 GLUD2P49448 558 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 PMS1P54277 932 aaKnown RBP22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 ANKRD40Q6AI12 368 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 KLHL10Q6JEL2 608 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 ADGRD2Q7Z7M1 963 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 PPM1EQ8WY54 764 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 PPP2R3CQ969Q6 453 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 FAM84AQ96KN4 292 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 INTS13Q9NVM9 706 aa22.33■■□□□ 1.17
HMGXB4-203ENST00000420166 PTPRJQ12913 1337 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 ANO9A1A5B4 782 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 TRIM49BA6NDI0 452 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 C2orf71A6NGG8 1288 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 HIDE1A8MVS5 230 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 PPEF2O14830 753 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 TRAPPC3O43617 180 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 CXCL14O95715 111 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 URODP06132 367 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 TMEM191BP0C7N4 346 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 BRCC3P46736 316 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 LRRC63Q05C16 580 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 ADAM9Q13443 819 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 PTPN14Q15678 1187 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 USP41Q3LFD5 358 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 C9orf57Q5W0N0 161 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 LMBRD2Q68DH5 695 aaPredicted RBP22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 WDR49Q8IV35 697 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 MRPL43Q8N983 215 aaKnown RBP22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 AUTS2Q8WXX7 1259 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 CCDC127Q96BQ5 260 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 FNBP1Q96RU3 617 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 CGRRF1Q99675 332 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 MTMR12Q9C0I1 747 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 GZF1Q9H116 711 aaPredicted RBP22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 CHST7Q9NS84 486 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 NUB1Q9Y5A7 615 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 IRAK3Q9Y616 596 aa22.32■■□□□ 1.16
HMGXB4-203ENST00000420166 REV3LO60673 3130 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 MAPK13O15264 365 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 AKAP3O75969 853 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 DLATP10515 647 aaKnown RBP22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 CA8P35219 290 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 DSG1Q02413 1049 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 HYAL1Q12794 435 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 FAM171A1Q5VUB5 890 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 KIAA1841Q6NSI8 718 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 ZC3H3Q8IXZ2 948 aaKnown RBP22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 C1orf127Q8N9H9 656 aa22.31■■□□□ 1.16
HMGXB4-203ENST00000420166 OR5B17Q8NGF7 314 aa22.31■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms