RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 TKTP29401 623 aaKnown RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 RAB33AQ14088 237 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ZBTB6Q15916 424 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ENOX2Q16206 610 aaKnown RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ZBTB41Q5SVQ8 909 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ATL3Q6DD88 541 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 SLFN12LQ6IEE8 588 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 OTOP3Q7RTS5 596 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 PDILTQ8N807 584 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 SPRYD3Q8NCJ5 442 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 SMG7Q92540 1137 aaKnown RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ZNF707Q96C28 371 aaPredicted RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 ACSF2Q96CM8 615 aaPredicted RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 STRA6Q9BX79 667 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 MRPL44Q9H9J2 332 aaKnown RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 RPF1Q9H9Y2 349 aaKnown RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 TUBGCP4Q9UGJ1 667 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 FBXW11Q9UKB1 542 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 CPSF3Q9UKF6 684 aaKnown RBP17.94■□□□□ 0.46
LINC00404-201ENST00000418660 NUB1Q9Y5A7 615 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 STYXL1Q9Y6J8 313 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 MYH15Q9Y2K3 1946 aa17.94■□□□□ 0.46
LINC00404-201ENST00000418660 LACTBL1A8MY62 500 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 SYN3O14994 580 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 PPP1R37O75864 691 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 CYP3A5P20815 502 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 OR1D2P34982 312 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 SPAG1Q07617 926 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 TRIM67Q6ZTA4 783 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 CD302Q8IX05 232 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 KCNG4Q8TDN1 519 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 KIF12Q96FN5 646 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 PRKD2Q9BZL6 878 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 CUEDC2Q9H467 287 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 PIDD1Q9HB75 910 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 WDR6Q9NNW5 1121 aaKnown RBP17.93■□□□□ 0.46
LINC00404-201ENST00000418660 OLFML3Q9NRN5 406 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 UBQLN1Q9UMX0 589 aaKnown RBP17.93■□□□□ 0.46
LINC00404-201ENST00000418660 CITO14578 2027 aa17.93■□□□□ 0.46
LINC00404-201ENST00000418660 FRMD3A2A2Y4 597 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 XPOTO43592 962 aaKnown RBP17.92■□□□□ 0.46
LINC00404-201ENST00000418660 IDEP14735 1019 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 LRPAP1P30533 357 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 PKP1Q13835 747 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 FOXD4L6Q3SYB3 417 aaPredicted RBP17.92■□□□□ 0.46
LINC00404-201ENST00000418660 VARS2Q5ST30 1063 aaKnown RBP17.92■□□□□ 0.46
LINC00404-201ENST00000418660 LIN9Q5TKA1 542 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 ADALQ6DHV7 355 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 SHC4Q6S5L8 630 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 RSPO2Q6UXX9 243 aaPredicted RBP17.92■□□□□ 0.46
LINC00404-201ENST00000418660 FOXD4L3Q6VB84 417 aaPredicted RBP17.92■□□□□ 0.46
LINC00404-201ENST00000418660 STAMQ92783 540 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 SUSD3Q96L08 255 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 LRRC27Q9C0I9 530 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 TNMDQ9H2S6 317 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 PANK4Q9NVE7 773 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 LIMD1Q9UGP4 676 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 RAPGEFL1Q9UHV5 662 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 EXOC7Q9UPT5 735 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 PCDHB13Q9Y5F0 798 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 CDY1Q9Y6F8 540 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 DENND4AQ7Z401 1863 aa17.92■□□□□ 0.46
LINC00404-201ENST00000418660 TISP43B9A030 160 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 HNRNPA1P09651 372 aaKnown RBP eCLIP17.91■□□□□ 0.46
LINC00404-201ENST00000418660 POU5F1Q01860 360 aaKnown RBP17.91■□□□□ 0.46
LINC00404-201ENST00000418660 SIGLEC14Q08ET2 396 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 ALCAMQ13740 583 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 POSTNQ15063 836 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 E2F4Q16254 413 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 AXDND1Q5T1B0 1012 aaPredicted RBP17.91■□□□□ 0.46
LINC00404-201ENST00000418660 L1TD1Q5T7N2 865 aaKnown RBP17.91■□□□□ 0.46
LINC00404-201ENST00000418660 BMP8AQ7Z5Y6 402 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 ACCSQ96QU6 501 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 KBTBD4Q9NVX7 518 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 TBC1D7Q9P0N9 293 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 AGO2Q9UKV8 859 aaKnown RBP17.91■□□□□ 0.46
LINC00404-201ENST00000418660 CFAP45Q9UL16 551 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 SORCS3Q9UPU3 1222 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 HCN4Q9Y3Q4 1203 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 VWA8A3KMH1 1905 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 CLUHO75153 1309 aa17.91■□□□□ 0.46
LINC00404-201ENST00000418660 TMEM221A6NGB7 291 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 H7C4K7 107 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 M0R296 226 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 GCNT3O95395 438 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 C8AP07357 584 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 HOXA9P31269 272 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 MCM4P33991 863 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 ACOT2P49753 483 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 AMPD3Q01432 767 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 MRPL58Q14197 206 aaKnown RBP17.9■□□□□ 0.46
LINC00404-201ENST00000418660 UVSSAQ2YD98 709 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 PPM1LQ5SGD2 360 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 SPATA1Q5VX52 437 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 SLC8B1Q6J4K2 584 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 HFE2Q6ZVN8 426 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 RTL10Q7L3V2 364 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 CCDC65Q8IXS2 484 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 UBALD2Q8IYN6 164 aa17.9■□□□□ 0.46
LINC00404-201ENST00000418660 IQUBQ8NA54 791 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms