RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 DPP3Q9NY33 737 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 R3HCC1Q9Y3T6 440 aaKnown RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 NFE2L3Q9Y4A8 694 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 TDRD15B5MCY1 1934 aaKnown RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 TMEM265A0A087WTH1 108 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 LRRIQ3A6PVS8 624 aaPredicted RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 NRP1O14786 923 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 STX10O60499 249 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 B4GALT3O60512 393 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 RB1P06400 928 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 CLCNKBP51801 687 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 CLDN10P78369 228 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 EPC2Q52LR7 807 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 HABP4Q5JVS0 413 aaKnown RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 CREBRFQ8IUR6 639 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 BORCS6Q96GS4 357 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 MTMR12Q9C0I1 747 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 GOLGA2P5Q9HBQ8 144 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 SPG21Q9NZD8 308 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 MAGEC2Q9UBF1 373 aaPredicted RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 MTUS1Q9ULD2 1270 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 PRG3Q9Y2Y8 225 aaPredicted RBP20■□□□□ 0.79
SEMA3B-202ENST00000418576 GBF1Q92538 1859 aa20■□□□□ 0.79
SEMA3B-202ENST00000418576 ARHGEF15O94989 841 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 LRPAP1P30533 357 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 PBX3P40426 434 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 UPP1Q16831 310 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 TCERG1LQ5VWI1 586 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 LMBRD2Q68DH5 695 aaPredicted RBP19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 DCLRE1AQ6PJP8 1040 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 TMEM169Q96HH4 297 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 ITGA11Q9UKX5 1188 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 TRIP11Q15643 1979 aa19.99■□□□□ 0.79
SEMA3B-202ENST00000418576 SMTNL1A8MU46 457 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 NT5C1B-RDH14C9J2C7 533 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 C5orf67F2Z3F1 127 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 PODXLO00592 558 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 B3GAT3O94766 335 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 MARSP56192 900 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 MCCD1P59942 119 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 DLG4P78352 724 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 KRT17Q04695 432 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 DCAF17Q5H9S7 520 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 LRSAM1Q6UWE0 723 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 OR5B17Q8NGF7 314 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 PLEKHO2Q8TD55 490 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 C11orf84Q9BUA3 381 aaPredicted RBP19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 ZNF576Q9H609 170 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 BECN2A8MW95 431 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 TADA2AO75478 443 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 GUCY2FP51841 1108 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 SLC39A11Q8N1S5 342 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 FBXO22Q8NEZ5 403 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 ARNTL2Q8WYA1 636 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 IGSF21Q96ID5 467 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 CNOT6LQ96LI5 555 aaKnown RBP19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 PAAF1Q9BRP4 392 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 CERS4Q9HA82 394 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 STK39Q9UEW8 545 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 PTPRJQ12913 1337 aa19.98■□□□□ 0.79
SEMA3B-202ENST00000418576 GOLGA6L3A6NEY3 463 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 SOX1O00570 391 aaPredicted RBP19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 PHACTR2O75167 634 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 FGF18O76093 207 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 KRT19P08727 400 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 GTF2H1P32780 548 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 C9orf57Q5W0N0 161 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 TRAPPC11Q7Z392 1133 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 AOPEPQ8N6M6 819 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 C1orf127Q8N9H9 656 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 KLHL23Q8NBE8 558 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 RABGGTAQ92696 567 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 TSPY26PQ9H489 355 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 CACNG4Q9UBN1 327 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 PUF60Q9UHX1 559 aaKnown RBP19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 ADAM28Q9UKQ2 775 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 NUB1Q9Y5A7 615 aa19.97■□□□□ 0.79
SEMA3B-202ENST00000418576 ANK1P16157 1881 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 TMEM189-UBE2V1I3L0A0 370 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 ITGB3P05106 788 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 TRIM49P0CI25 452 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 TRIM49CP0CI26 452 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 ZNF445P59923 1031 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 RBP5P82980 135 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 BIRC3Q13489 604 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 ZNF697Q5TEC3 545 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 ZNF516Q92618 1163 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 LRCH3Q96II8 777 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 SAMSN1Q9NSI8 373 aaKnown RBP19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 FANCLQ9NW38 375 aa19.96■□□□□ 0.79
SEMA3B-202ENST00000418576 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.96■□□□□ 0.798e-7■■□□□ 11.8
SEMA3B-202ENST00000418576 ANO9A1A5B4 782 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 PIRO00625 290 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 TRAPPC3O43617 180 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 KIF4AO95239 1232 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 PAX3P23760 479 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 PNPLA4P41247 253 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 GCLMP48507 274 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 PLCB3Q01970 1234 aa19.95■□□□□ 0.78
SEMA3B-202ENST00000418576 TRPC3Q13507 836 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms