RNA–Protein interactions for RNA: ENST00000417833.2

TGFBR3-203, Transcript of transforming growth factor beta receptor 3, humanhuman

TSL 4

Gene TGFBR3, Length 551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR3-203ENST00000417833 SOX4Q06945 474 aaPredicted RBP14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 ELAVL2Q12926 359 aaKnown RBP14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 KCNB1Q14721 858 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 KMT5BQ4FZB7 885 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 TPRNQ4KMQ1 711 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 ZBTB41Q5SVQ8 909 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 KIAA0319Q5VV43 1072 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 PLPP4Q5VZY2 271 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 FUT10Q6P4F1 479 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 LRSAM1Q6UWE0 723 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 TMEM174Q8WUU8 243 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 GPR62Q9BZJ7 368 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 SLC39A2Q9NP94 309 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 MRPL17Q9NRX2 175 aaKnown RBP14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 EXOC1Q9NV70 894 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 PCDHGC5Q9Y5F6 944 aa14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 SF3B1O75533 1304 aaKnown RBP eCLIP14.38□□□□□ -0.11
TGFBR3-203ENST00000417833 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 FAM86C2PA6NEL3 165 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 GOLGA6L3A6NEY3 463 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 TGFB1I1O43294 461 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 XPOTO43592 962 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 EXTL3O43909 919 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 KIF4AO95239 1232 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 C1RP00736 705 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 LRPAP1P30533 357 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 GTF2F1P35269 517 aaKnown RBP eCLIP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 LTBRP36941 435 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 ACOT2P49753 483 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 CLCNKBP51801 687 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 STK4Q13043 487 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 PTPN14Q15678 1187 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 KNOP1Q1ED39 458 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 USP41Q3LFD5 358 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 LEXMQ3ZCV2 418 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 CD300LGQ6UXG3 332 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 TAS1R1Q7RTX1 841 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 RBM23Q86U06 439 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 NT5DC4Q86YG4 428 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 C12orf56Q8IXR9 622 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 KHSRPQ92945 711 aaKnown RBP eCLIP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 CCDC47Q96A33 483 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 KCNH6Q9H252 994 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 RXFP1Q9HBX9 757 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 KIAA1586Q9HCI6 787 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 UBQLN1Q9UMX0 589 aaKnown RBP14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 BRWD1Q9NSI6 2320 aa14.37□□□□□ -0.11
TGFBR3-203ENST00000417833 ANK1P16157 1881 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 CACNA1AO00555 2505 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 SYCE3A1L190 88 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 PER2O15055 1255 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 TRAPPC3O43617 180 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 B3GAT3O94766 335 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 IL18RAPO95256 599 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 PRR29P0C7W0 189 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 PAX3P23760 479 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 GLUD2P49448 558 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 PUS10Q3MIT2 529 aaKnown RBP14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 SPATA1Q5VX52 437 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 ARMCX5Q6P1M9 558 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 PPFIBP1Q86W92 1011 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 KIAA0895Q8NCT3 520 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 SPATA20Q8TB22 786 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 RABGGTAQ92696 567 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 C18orf25Q96B23 403 aaPredicted RBP14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 KIF12Q96FN5 646 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 FBXL18Q96ME1 805 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 CBWD1Q9BRT8 395 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 EMILIN2Q9BXX0 1053 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 IGFLR1Q9H665 355 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 GOLGA2P5Q9HBQ8 144 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 CLDND1Q9NY35 253 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 FNIP2Q9P278 1114 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 CACNG4Q9UBN1 327 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 C2CD2Q9Y426 696 aa14.36□□□□□ -0.11
TGFBR3-203ENST00000417833 MYO7AQ13402 2215 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 PODXLO00592 558 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 LINC01565O15544 149 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 CLASP2O75122 1294 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 CSPG5O95196 566 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 KIF20AO95235 890 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 GLP2RO95838 553 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 URODP06132 367 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 FGFR3P22607 806 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 PDXDC1Q6P996 788 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 BRSK2Q8IWQ3 736 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 GPD1LQ8N335 351 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 GOLGA5Q8TBA6 731 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 SLC22A17Q8WUG5 538 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 AUTS2Q8WXX7 1259 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 MSLNLQ96KJ4 702 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 KLHL5Q96PQ7 755 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 GSDMAQ96QA5 445 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 FAM213AQ9BRX8 229 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 AGPAT3Q9NRZ7 376 aa14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
TGFBR3-203ENST00000417833 CNPP09543 421 aaKnown RBP14.34□□□□□ -0.11
TGFBR3-203ENST00000417833 SRGAP2BP0DMP2 458 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms