RNA–Protein interactions for RNA: ENST00000417799.2

NIFKP3-201, Transcript of nucleolar protein interacting with the FHA domain of MKI67 pseudogene 3, humanhuman

BASIC

Gene NIFKP3, Length 865 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIFKP3-201ENST00000417799 GPR75-ASB3A0A0A6YYF3 556 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 GOLGA6L22H0YM25 854 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 GPAA1O43292 621 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 EPB41L2O43491 1005 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 MBD4O95243 580 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 BAG3O95817 575 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 RPS12P25398 132 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 AOAHP28039 575 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 MMP14P50281 582 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 ERVK-21P61565 698 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 CACNB2Q08289 660 aaPredicted RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 TARBP2Q15633 366 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 FRMD7Q6ZUT3 714 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 LCORLQ8N3X6 602 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 MIGA1Q8NAN2 632 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 TEKT1Q969V4 418 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 STRBPQ96SI9 672 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 RIOK1Q9BRS2 568 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 NOL10Q9BSC4 688 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 LSG1Q9H089 658 aaKnown RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 RNF38Q9H0F5 515 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 ARMT1Q9H993 441 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 TOPORSQ9NS56 1045 aaPredicted RBP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 C14orf119Q9NWQ9 140 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 MROH7-TTC4A0A0A0MT08 1334 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 GAKO14976 1311 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 ZNF541Q9H0D2 1346 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 DOCK2Q92608 1830 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 MYH13Q9UKX3 1938 aa6.89□□□□□ -1.31
NIFKP3-201ENST00000417799 MYOCOSA0A1B0GUC4 107 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 LCHNA4D1U4 455 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 GABRDO14764 452 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 KDM1AO60341 852 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 ENO2P09104 434 aaPredicted RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 TMEM253P0C7T8 217 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 HSPD1P10809 573 aaKnown RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 GNAT2P19087 354 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 BTDP43251 543 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 GMPSP49915 693 aaPredicted RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 RBM5P52756 815 aaKnown RBP eCLIP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 NCKAP1LP55160 1127 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 DYNLL1P63167 89 aaKnown RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 PTH1RQ03431 593 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 MLANAQ16655 118 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 VPS53Q5VIR6 699 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 PRAMEF18Q5VWM3 479 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 APOBEC3HQ6NTF7 200 aaKnown RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 PROSER1Q86XN7 944 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 CERS3Q8IU89 383 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 GPC2Q8N158 579 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 DPF2Q92785 391 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 MAP4K1Q92918 833 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 E2F7Q96AV8 911 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 FOXRED1Q96CU9 486 aaPredicted RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 MCOLN1Q9GZU1 580 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 CNTD2Q9H8S5 307 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 UPF2Q9HAU5 1272 aaKnown RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 KCNK12Q9HB15 430 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 AATFQ9NY61 560 aaKnown RBP eCLIP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 BTBD7Q9P203 1132 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 USP36Q9P275 1121 aaKnown RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 MBD1Q9UIS9 605 aaPredicted RBP6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 MSRAQ9UJ68 235 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 HDAC9Q9UKV0 1011 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 SLC4A4Q9Y6R1 1079 aa6.88□□□□□ -1.31
NIFKP3-201ENST00000417799 MYO5AQ9Y4I1 1855 aaKnown RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 RPAP1Q9BWH6 1393 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 UBA6A0AVT1 1052 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 GOLGA8AA7E2F4 631 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 GOLGA8BA8MQT2 603 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 PRKAB2O43741 272 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 FBXO21O94952 628 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 C8BP07358 591 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 PFKLP17858 780 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 PTGS1P23219 599 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 MC3RP41968 323 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 ZNF280AP59817 542 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 KLF1Q13351 362 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 ALX1Q15699 326 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 VASNQ6EMK4 673 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 RTN4RL1Q86UN2 441 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 CILP2Q8IUL8 1156 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 PHYKPLQ8IUZ5 450 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 C7orf31Q8N865 590 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 SH3RF3Q8TEJ3 882 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 C22orf23Q9BZE7 217 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 CRNKL1Q9BZJ0 848 aaKnown RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 NACAP1Q9BZK3 213 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 SLC39A2Q9NP94 309 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 USP40Q9NVE5 1235 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 UCKL1Q9NWZ5 548 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 RBPJLQ9UBG7 517 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 CNOT7Q9UIV1 285 aaKnown RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 SPEF1Q9Y4P9 236 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 PCDHA5Q9Y5H7 936 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 MYH7P12883 1935 aa6.87□□□□□ -1.31
NIFKP3-201ENST00000417799 SBF1O95248 1867 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms