RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 SGPL1O95470 568 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 AKAP5P24588 427 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 VAV2P52735 878 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 GNG11P61952 73 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 SLC47A2Q86VL8 602 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 PALB2Q86YC2 1186 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 FAM71AQ8IYT1 594 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 C1orf127Q8N9H9 656 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 ANKRD36BP1Q96IX9 119 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 SYT11Q9BT88 431 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 TRIM6Q9C030 488 aaPredicted RBP18.27■□□□□ 0.52
CALD1-204ENST00000417172 DNAI1Q9UI46 699 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 SIX4Q9UIU6 781 aa18.27■□□□□ 0.52
CALD1-204ENST00000417172 MOXD2PA6NHM9 499 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 DDX3XO00571 662 aaKnown RBP eCLIP18.27■□□□□ 0.51
CALD1-204ENST00000417172 ZC3H11AO75152 810 aaKnown RBP eCLIP18.27■□□□□ 0.51
CALD1-204ENST00000417172 TNNC2P02585 160 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 KRT19P08727 400 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 ETF1P62495 437 aaKnown RBP18.27■□□□□ 0.51
CALD1-204ENST00000417172 CCDC122Q5T0U0 273 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 RSPH3Q86UC2 560 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 GLYCTKQ8IVS8 523 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 RNF39Q9H2S5 420 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 AGO3Q9H9G7 860 aaKnown RBP18.27■□□□□ 0.51
CALD1-204ENST00000417172 NOD1Q9Y239 953 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 R3HCC1Q9Y3T6 440 aaKnown RBP18.27■□□□□ 0.51
CALD1-204ENST00000417172 DAAM1Q9Y4D1 1078 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 BZW2Q9Y6E2 419 aaKnown RBP18.27■□□□□ 0.51
CALD1-204ENST00000417172 SCN1AP35498 2009 aa18.27■□□□□ 0.51
CALD1-204ENST00000417172 MKI67P46013 3256 aaKnown RBP18.26■□□□□ 0.51
CALD1-204ENST00000417172 CABYRO75952 493 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 RECQL4O94761 1208 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 ASS1P00966 412 aaKnown RBP18.26■□□□□ 0.51
CALD1-204ENST00000417172 ITGB3P05106 788 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 MAGEA1P43355 309 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 AP3M2P53677 418 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 GCNT1Q02742 428 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 NFX1Q12986 1120 aaKnown RBP18.26■□□□□ 0.51
CALD1-204ENST00000417172 PCBP1Q15365 356 aaKnown RBP eCLIP18.26■□□□□ 0.51
CALD1-204ENST00000417172 GLRA4Q5JXX5 417 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 ZMAT2Q96NC0 199 aaKnown RBP18.26■□□□□ 0.51
CALD1-204ENST00000417172 CCDC94Q9BW85 323 aaPredicted RBP18.26■□□□□ 0.51
CALD1-204ENST00000417172 KLK14Q9P0G3 267 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 ST3GAL5Q9UNP4 418 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 PAXBP1Q9Y5B6 917 aa18.26■□□□□ 0.51
CALD1-204ENST00000417172 RPS6KA5O75582 802 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 GHRP10912 638 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 KRT5P13647 590 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 AXLP30530 894 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 CUL2Q13617 745 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 TMEM132DQ14C87 1099 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 TRIM71Q2Q1W2 868 aaKnown RBP18.25■□□□□ 0.51
CALD1-204ENST00000417172 TAF3Q5VWG9 929 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 SCARA5Q6ZMJ2 495 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 NOP9Q86U38 636 aaKnown RBP18.25■□□□□ 0.51
CALD1-204ENST00000417172 CXorf38Q8TB03 319 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 DEFB118Q96PH6 123 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 TSEN34Q9BSV6 310 aaKnown RBP18.25■□□□□ 0.51
CALD1-204ENST00000417172 XYLT2Q9H1B5 865 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 STARD7Q9NQZ5 370 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 MACROD2A1Z1Q3 448 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 TRPC3Q13507 836 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 TWF2Q6IBS0 349 aaKnown RBP18.25■□□□□ 0.51
CALD1-204ENST00000417172 SMG8Q8ND04 991 aaKnown RBP18.25■□□□□ 0.51
CALD1-204ENST00000417172 EPS8L1Q8TE68 723 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 KIF12Q96FN5 646 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 SNX27Q96L92 541 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 ASB7Q9H672 318 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 SEPT11Q9NVA2 429 aaKnown RBP18.25■□□□□ 0.51
CALD1-204ENST00000417172 SALL4Q9UJQ4 1053 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 NAGPAQ9UK23 515 aa18.25■□□□□ 0.51
CALD1-204ENST00000417172 TMCO5BA8MYB1 307 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 ACO1P21399 889 aaKnown RBP18.24■□□□□ 0.51
CALD1-204ENST00000417172 CD52P31358 61 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 KYAT1Q16773 422 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 ZNF569Q5MCW4 686 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 ZNF618Q5T7W0 954 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 RPAINQ86UA6 219 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 ARRDC4Q8NCT1 418 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 SLC30A5Q8TAD4 765 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 U2AF1L4Q8WU68 220 aaKnown RBP18.24■□□□□ 0.51
CALD1-204ENST00000417172 PAK6Q9NQU5 681 aaPredicted RBP18.24■□□□□ 0.51
CALD1-204ENST00000417172 TAS2R14Q9NYV8 317 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 NENFQ9UMX5 172 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 POLIQ9UNA4 740 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 IPPQ9Y573 584 aa18.24■□□□□ 0.51
CALD1-204ENST00000417172 MEIS3P2A8K0S8 358 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 KBTBD13C9JR72 458 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 CHRNB2P17787 502 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 PTK7Q13308 1070 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 ZNF699Q32M78 642 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 ALKBH5Q6P6C2 394 aaKnown RBP18.23■□□□□ 0.51
CALD1-204ENST00000417172 SLC35F6Q8N357 371 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 C18orf25Q96B23 403 aaPredicted RBP18.23■□□□□ 0.51
CALD1-204ENST00000417172 IMPG2Q9BZV3 1241 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 TUBGCP4Q9UGJ1 667 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 NOCTQ9UK39 431 aaKnown RBP18.23■□□□□ 0.51
CALD1-204ENST00000417172 PHF24Q9UPV7 400 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 KIF5CO60282 957 aa18.23■□□□□ 0.51
CALD1-204ENST00000417172 MMEP08473 750 aa18.23■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 137.1 ms