RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 CCDC51Q96ER9 411 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 ZNF558Q96NG5 402 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 ERGIC2Q96RQ1 377 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 C2orf40Q9H1Z8 148 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 AGPAT5Q9NUQ2 364 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM105AQ9NUU6 356 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 CGNQ9P2M7 1197 aaKnown RBP10□□□□□ -0.81
CHRNA1-206ENST00000416004 PYCARDQ9ULZ3 195 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 FRMD4BQ9Y2L6 1034 aa10□□□□□ -0.81
CHRNA1-206ENST00000416004 COL6A3P12111 3177 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 EPHB6O15197 1021 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 B4GALT5O43286 388 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 TRIM49P0CI25 452 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 TRIM49CP0CI26 452 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 EFNA5P52803 228 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 ADKP55263 362 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 GSDMDP57764 484 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 DLG4P78352 724 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 CCZ1BP86790 482 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 CCZ1P86791 482 aaPredicted RBP9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 APBA1Q02410 837 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 MBTD1Q05BQ5 628 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 ZBTB41Q5SVQ8 909 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 C1orf220Q5T0J3 134 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 FKBP15Q5T1M5 1219 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 TCERG1LQ5VWI1 586 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 KLHL23Q8NBE8 558 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 CPLX3Q8WVH0 158 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 POMGNT1Q8WZA1 660 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 CRACR2AQ9BSW2 395 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 TRAIPQ9BWF2 469 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 METTL14Q9HCE5 456 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 ALG13Q9NP73 1137 aaKnown RBP9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 PRDM6Q9NQX0 595 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 KANSL3Q9P2N6 904 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 STK39Q9UEW8 545 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 PLAGL2Q9UPG8 496 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 STYXL1Q9Y6J8 313 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 CNTNAP2Q9UHC6 1331 aa9.99□□□□□ -0.81
CHRNA1-206ENST00000416004 CCDC66A2RUB6 948 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 PRKCBP05771 671 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 GARTP22102 1010 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 SCP2P22307 547 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CASP14P31944 242 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ABCD1P33897 745 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CRIPAKQ8N1N5 446 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 COLGALT1Q8NBJ5 622 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CCDC150Q8NCX0 1101 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 HELQQ8TDG4 1101 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 POF1BQ8WVV4 589 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 FBXL18Q96ME1 805 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 COL25A1Q9BXS0 654 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 TTYH3Q9C0H2 523 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 FZD8Q9H461 694 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 UBE2ZQ9H832 354 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 TLR9Q9NR96 1032 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 PRMT7Q9NVM4 692 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ANKFY1Q9P2R3 1169 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CHD9Q3L8U1 2897 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 A0A0B4J269 797 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 TTC26A0AVF1 554 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ABLIM1O14639 778 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 GRM6O15303 877 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 MFAP3LO75121 409 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 FGF18O76093 207 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CSPG5O95196 566 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 AFPP02771 609 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ITGA4P13612 1032 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CA8P35219 290 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 GATMP50440 423 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CBX1P83916 185 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 BFSP1Q12934 665 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 SNRNP35Q16560 246 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 MAPK6Q16659 721 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 AMHR2Q16671 573 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CBWD6Q4V339 395 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 TCEAL5Q5H9L2 206 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CBWD3Q5JTY5 395 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CBWD5Q5RIA9 395 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 EEF1DP3Q658K8 133 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CDR2LQ86X02 465 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 C17orf53Q8N3J3 647 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 PDCL2Q8N4E4 241 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 TMEM169Q96HH4 297 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM84AQ96KN4 292 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CASD1Q96PB1 797 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ACO2Q99798 780 aaKnown RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ADPGKQ9BRR6 497 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM213AQ9BRX8 229 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 NFKBIZQ9BYH8 718 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 ENTPD7Q9NQZ7 604 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 FAM207AQ9NSI2 230 aaPredicted RBP9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 SPTLC3Q9NUV7 552 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 CLDND1Q9NY35 253 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 SPG21Q9NZD8 308 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 LZTS1Q9Y250 596 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 INPP5FQ9Y2H2 1132 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 PCDHB2Q9Y5E7 798 aa9.98□□□□□ -0.81
CHRNA1-206ENST00000416004 PLXNA4Q9HCM2 1894 aa9.97□□□□□ -0.81
CHRNA1-206ENST00000416004 AKR1B15C9JRZ8 316 aaPredicted RBP9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms