RNA–Protein interactions for RNA: ENST00000415749.1

EPHA4-204, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-204ENST00000415749 DDX11Q96FC9 970 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 TEKT5Q96M29 485 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 TAAR9Q96RI9 348 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 CD244Q9BZW8 370 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 RNF38Q9H0F5 515 aa7.21□□□□□ -1.26
EPHA4-204ENST00000415749 TOPORSQ9NS56 1045 aaPredicted RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 TRMT112Q9UI30 125 aaKnown RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 MORC2Q9Y6X9 1032 aaPredicted RBP7.21□□□□□ -1.26
EPHA4-204ENST00000415749 MANSC4A6NHS7 340 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 A6NNZ2 444 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 MAFGO15525 162 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 SEMA7AO75326 666 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 SETSIPP0DME0 302 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 HSPA5P11021 654 aaKnown RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 ZNF200P98182 395 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 PRKG1Q13976 671 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 ZNF174Q15697 407 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 LONRF1Q17RB8 773 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 ALFQ53S48 1182 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 BTBD8Q5XKL5 378 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 MCTP1Q6DN14 999 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 CCDC70Q6NSX1 233 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 ETV3LQ6ZN32 361 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 PCGF5Q86SE9 256 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 ZC3H18Q86VM9 953 aaKnown RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 MIB1Q86YT6 1006 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 FAM126BQ8IXS8 530 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 EFHBQ8N7U6 833 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 FBXO15Q8NCQ5 510 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 TBC1D16Q8TBP0 767 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 ZHX3Q9H4I2 956 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 MYOZ2Q9NPC6 264 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 IPPQ9Y573 584 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 HCFC2Q9Y5Z7 792 aa7.2□□□□□ -1.26
EPHA4-204ENST00000415749 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 MKI67P46013 3256 aaKnown RBP7.2□□□□□ -1.26
EPHA4-204ENST00000415749 PAPPA2Q9BXP8 1791 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 TEX51A0A1B0GUA7 166 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 ABHD14A-ACY1A0A1B0GW23 586 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 F5H423 210 aaPredicted RBP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 KRT37O76014 449 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 NCAM1P13591 858 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 PFKLP17858 780 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 AKAP5P24588 427 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 GPR3P46089 330 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 EIF4A1P60842 406 aaKnown RBP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 SP3Q02447 781 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 TERF2Q15554 542 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 HSP90AB3PQ58FF7 597 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 RASSF3Q86WH2 238 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 NOSTRINQ8IVI9 506 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 TMTC2Q8N394 836 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 ARRDC4Q8NCT1 418 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 ACRBPQ8NEB7 543 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 CELF1Q92879 486 aaKnown RBP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 ZNF333Q96JL9 665 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 THUMPD2Q9BTF0 503 aaKnown RBP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 PCIF1Q9H4Z3 704 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 KCNH7Q9NS40 1196 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 RIC8BQ9NVN3 520 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 DTLQ9NZJ0 730 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 GTF2A1LQ9UNN4 478 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 NOC2LQ9Y3T9 749 aaKnown RBP7.19□□□□□ -1.26
EPHA4-204ENST00000415749 A0A0C4DFX4 3053 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 SH3TC1Q8TE82 1336 aa7.19□□□□□ -1.26
EPHA4-204ENST00000415749 SCDO00767 359 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 KCNK3O14649 394 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 TPP1O14773 563 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 SLC26A4O43511 780 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 PTPN1P18031 435 aaKnown RBP7.18□□□□□ -1.26
EPHA4-204ENST00000415749 ALDH5A1P51649 535 aaPredicted RBP7.18□□□□□ -1.26
EPHA4-204ENST00000415749 RPS8P62241 208 aaKnown RBP7.18□□□□□ -1.26
EPHA4-204ENST00000415749 CNGB1Q14028 1251 aaPredicted RBP7.18□□□□□ -1.26
EPHA4-204ENST00000415749 ARHGEF6Q15052 776 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 LLGL1Q15334 1064 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 SF3B3Q15393 1217 aaKnown RBP7.18□□□□□ -1.26
EPHA4-204ENST00000415749 SLC9C1Q4G0N8 1177 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 PAN2Q504Q3 1202 aaKnown RBP7.18□□□□□ -1.26
EPHA4-204ENST00000415749 OTUD7BQ6GQQ9 843 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 FAM43AQ8N2R8 423 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 TEX19Q8NA77 164 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 LMBR1Q8WVP7 490 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 CLEC4DQ8WXI8 215 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 CPA5Q8WXQ8 436 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 AS3MTQ9HBK9 375 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 PCDH18Q9HCL0 1135 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 NUDCQ9Y266 331 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 RPS6KL1Q9Y6S9 549 aa7.18□□□□□ -1.26
EPHA4-204ENST00000415749 TAF1P21675 1872 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 CCER2I3L3R5 266 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 ZBTB48P10074 688 aaPredicted RBP7.17□□□□□ -1.26
EPHA4-204ENST00000415749 SLC5A1P13866 664 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 FAHP16930 419 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 TYRP1P17643 537 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 EIF2S2P20042 333 aaKnown RBP7.17□□□□□ -1.26
EPHA4-204ENST00000415749 SARSP49591 514 aaKnown RBP7.17□□□□□ -1.26
EPHA4-204ENST00000415749 NKX3-2P78367 333 aa7.17□□□□□ -1.26
EPHA4-204ENST00000415749 CAP1Q01518 475 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms