RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 IMPACTQ9P2X3 320 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 PARP2Q9UGN5 583 aa16.75■□□□□ 0.27
SHMT2-202ENST00000414700 AJAP1Q9UKB5 411 aaPredicted RBP16.75■□□□□ 0.27
SHMT2-202ENST00000414700 ZRANB2O95218 330 aaKnown RBP eCLIP16.74■□□□□ 0.271e-7■□□□□ 9.4
SHMT2-202ENST00000414700 VNN1O95497 513 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 ATF7P17544 494 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 AFF1P51825 1210 aaKnown RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 ENPEPQ07075 957 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 TC2NQ8N9U0 490 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 SNX27Q96L92 541 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 ZFP42Q96MM3 310 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 PI4K2AQ9BTU6 479 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 INTS2Q9H0H0 1204 aaKnown RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 TRIM43BA6NCK2 446 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 IL18RAPO95256 599 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 CST3P01034 146 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 GTF2H1P32780 548 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 GUCY2FP51841 1108 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 BIRC3Q13489 604 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 KYAT1Q16773 422 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 PLEKHG4Q58EX7 1191 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 ALKAL1Q6UXT8 129 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 APBB1IPQ7Z5R6 666 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 GPIHBP1Q8IV16 184 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 FBXL13Q8NEE6 735 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 TRIM43Q96BQ3 446 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 GANQ9H2C0 597 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 NLRC4Q9NPP4 1024 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 PRDM5Q9NQX1 630 aaPredicted RBP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 COQ4Q9Y3A0 265 aa16.74■□□□□ 0.27
SHMT2-202ENST00000414700 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP16.74■□□□□ 0.27
SHMT2-202ENST00000414700 STX10O60499 249 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 N4BP1O75113 896 aaKnown RBP16.73■□□□□ 0.27
SHMT2-202ENST00000414700 KCNJ6P48051 423 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 MAPK8IP2Q13387 824 aaPredicted RBP16.73■□□□□ 0.27
SHMT2-202ENST00000414700 PHLDB3Q6NSJ2 640 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 TRAPPC11Q7Z392 1133 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 DEFB128Q7Z7B8 93 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 PPFIBP1Q86W92 1011 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 NEK11Q8NG66 645 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 VWCEQ96DN2 955 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 ASB7Q9H672 318 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 RAB20Q9NX57 234 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 PLAGL2Q9UPG8 496 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 SCN1AP35498 2009 aa16.73■□□□□ 0.27
SHMT2-202ENST00000414700 A0A0U1RQF3 1178 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 PMM2O15305 246 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 P4HA2O15460 535 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 ATP8B1O43520 1251 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 MFAP3LO75121 409 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 YARSP54577 528 aaKnown RBP16.72■□□□□ 0.27
SHMT2-202ENST00000414700 POLR2FP61218 127 aaKnown RBP16.72■□□□□ 0.27
SHMT2-202ENST00000414700 SURF1Q15526 300 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 DUOXA2Q1HG44 320 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 ARHGAP29Q52LW3 1261 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 KLHDC7AQ5VTJ3 777 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 TMCO3Q6UWJ1 677 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 RNF169Q8NCN4 708 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 EHBP1Q8NDI1 1231 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 PPP1R13BQ96KQ4 1090 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 TRAIPQ9BWF2 469 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 HLA-DRAP01903 254 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 TMEM191BP0C7N4 346 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 UCHL3P15374 230 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 POU5F1Q01860 360 aaKnown RBP16.72■□□□□ 0.27
SHMT2-202ENST00000414700 COL13A1Q5TAT6 717 aaPredicted RBP16.72■□□□□ 0.27
SHMT2-202ENST00000414700 AGMOQ6ZNB7 445 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 ARHGEF19Q8IW93 802 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 C1orf127Q8N9H9 656 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 KIF12Q96FN5 646 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 PLCB1Q9NQ66 1216 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 RGS18Q9NS28 235 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 CNTN3Q9P232 1028 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 CAPN11Q9UMQ6 739 aa16.72■□□□□ 0.27
SHMT2-202ENST00000414700 KRT9P35527 623 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 PIK3CAP42336 1068 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 CETN1Q12798 172 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 TMEM132DQ14C87 1099 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 FIGNQ5HY92 759 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 E4F1Q66K89 784 aaPredicted RBP16.71■□□□□ 0.27
SHMT2-202ENST00000414700 SPOPLQ6IQ16 392 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 GSTCDQ8NEC7 633 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 CXorf38Q8TB03 319 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 BAP1Q92560 729 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 KAT5Q92993 513 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 C18orf25Q96B23 403 aaPredicted RBP16.71■□□□□ 0.27
SHMT2-202ENST00000414700 TUBGCP4Q9UGJ1 667 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 SIX4Q9UIU6 781 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 LAMA3Q16787 3333 aa16.71■□□□□ 0.27
SHMT2-202ENST00000414700 MICAL3Q7RTP6 2002 aa16.71■□□□□ 0.26
SHMT2-202ENST00000414700 SMIM28A0A1B0GU29 152 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 C9IYK1 514 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 AKR1B15C9JRZ8 316 aaPredicted RBP16.7■□□□□ 0.26
SHMT2-202ENST00000414700 PTGESO14684 152 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 ZNF623O75123 536 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 ITGA4P13612 1032 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 MLH1P40692 756 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 NCOA4Q13772 614 aa16.7■□□□□ 0.26
SHMT2-202ENST00000414700 IQCEQ6IPM2 695 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms