RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 KCT2Q8NC54 265 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 CYB5D2Q8WUJ1 264 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 CRYGNQ8WXF5 182 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 KISS1RQ969F8 398 aaPredicted RBP5.5□□□□□ -1.53
VPS41-205ENST00000414632 ISL2Q96A47 359 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 ZBTB10Q96DT7 871 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 SCLYQ96I15 445 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 EXOC2Q96KP1 924 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 SDF4Q9BRK5 362 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 ZNF577Q9BSK1 485 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 C16orf70Q9BSU1 422 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 DHRS4Q9BTZ2 278 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 PHF20Q9BVI0 1012 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.5□□□□□ -1.53
VPS41-205ENST00000414632 IRF2BPLQ9H1B7 796 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 GLT8D2Q9H1C3 349 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 WNT8AQ9H1J5 351 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 HIPK3Q9H422 1215 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 SUGCTQ9HAC7 445 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 SLC9A2Q9UBY0 812 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 AP4E1Q9UPM8 1137 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 LAMA3Q16787 3333 aa5.5□□□□□ -1.53
VPS41-205ENST00000414632 MICAL3Q7RTP6 2002 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 CHD9Q3L8U1 2897 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 BTBD18B2RXH4 712 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 HAS3O00219 553 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 IPO5O00410 1097 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 MSH4O15457 936 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 DHX15O43143 795 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 SLC37A4O43826 429 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 RNGTTO60942 597 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 PPFIA4O75335 1185 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 RFPL3O75679 317 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 CCNE2O96020 404 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 TIMP1P01033 207 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 MMP1P03956 469 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 ITGAVP06756 1048 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 CYP3A4P08684 503 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SMIM10L2AP0DMW4 78 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SMIM10L2BP0DMW5 78 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 ADH5P11766 374 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 CSF2RAP15509 400 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 XBP1P17861 261 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 ACTR2P61160 394 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 RAC1P63000 192 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 FPGSQ05932 587 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SOX4Q06945 474 aaPredicted RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 TRIM29Q14134 588 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 NONOQ15233 471 aaKnown RBP eCLIP5.49□□□□□ -1.53
VPS41-205ENST00000414632 SHHQ15465 462 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 HABP4Q5JVS0 413 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 PRAMEF13Q5VWM6 474 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 NFRKBQ6P4R8 1299 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 ACAD11Q709F0 780 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 DEFB128Q7Z7B8 93 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SCUBE1Q8IWY4 988 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 DIS3L2Q8IYB7 885 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 C12orf50Q8NA57 414 aaPredicted RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 FAM184AQ8NB25 1140 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 DAGLBQ8NCG7 672 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SMG8Q8ND04 991 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 GIMAP8Q8ND71 665 aaPredicted RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 LRRN4CLQ8ND94 238 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 TRAPPC12Q8WVT3 735 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 WASF1Q92558 559 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 GLG1Q92896 1179 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 IRF7Q92985 503 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 PPP1R14AQ96A00 147 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 LENG9Q96B70 501 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 TMX3Q96JJ7 454 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 CDHR1Q96JP9 859 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 C8orf76Q96K31 380 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 ZSCAN31Q96LW9 406 aaPredicted RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 TOX2Q96NM4 488 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 IPO9Q96P70 1041 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 CTAGE1Q96RT6 745 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 PCYT2Q99447 389 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SENP7Q9BQF6 1050 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 KATNAL1Q9BW62 490 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 KLHL25Q9H0H3 589 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 PRO3102Q9H379 93 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 RNPEPQ9H4A4 650 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 PIDD1Q9HB75 910 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 CYP4F12Q9HCS2 524 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 SETD4Q9NVD3 440 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 GTF2IRD1Q9UHL9 959 aa5.49□□□□□ -1.53
VPS41-205ENST00000414632 MRPS23Q9Y3D9 190 aaKnown RBP5.49□□□□□ -1.53
VPS41-205ENST00000414632 A0A087X0B3 334 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 A0A0A0MRY4 1105 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 TRBV23-1A0A0A0MS06 115 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 TRAV20A0A0B4J274 112 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 C17orf102A2RUQ5 167 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 KIF28PB7ZC32 967 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 PLD2O14939 933 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 CBFA2T2O43439 604 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 CCNT1O60563 726 aaKnown RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 GAS7O60861 476 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 WFS1O76024 890 aa5.48□□□□□ -1.53
VPS41-205ENST00000414632 CELA2BP08218 269 aaPredicted RBP5.48□□□□□ -1.53
VPS41-205ENST00000414632 GJB2P29033 226 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms