RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 GPR85P60893 370 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 LRRC74AQ0VAA2 488 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 NFX1Q12986 1120 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 CUL1Q13616 776 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RRS1Q15050 365 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PARP6Q2NL67 630 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PEX26Q7Z412 305 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RALGPS2Q86X27 583 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 CCNYL1Q8N7R7 359 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 NRG4Q8WWG1 115 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TTC17Q96AE7 1141 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 LTV1Q96GA3 475 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 NOX5Q96PH1 765 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZNF317Q96PQ6 595 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 DPH5Q9H2P9 285 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 DENND2DQ9H6A0 471 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 MAN1C1Q9NR34 630 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CNTN3Q9P232 1028 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ADD3Q9UEY8 706 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PGAP2Q9UHJ9 254 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PCDHA12Q9UN75 941 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 EDARQ9UNE0 448 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PA2G4Q9UQ80 394 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 TRAF3IP3Q9Y228 551 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 AP3M1Q9Y2T2 418 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PCDHB13Q9Y5F0 798 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SNX5Q9Y5X3 404 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 NFAT5O94916 1531 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CPS1P31327 1500 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PTPRMP28827 1452 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PHRF1Q9P1Y6 1649 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PCP4L1A6NKN8 68 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 GOLGA8BA8MQT2 603 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 FADS2P1A8MWK0 482 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CENPBD1B2RD01 187 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 XPOTO43592 962 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 ONECUT3O60422 494 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 GPC4O75487 556 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PLEKHA8P1O95397 391 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZCCHC18P0CG32 403 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 IL10P22301 178 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 IGHMBP2P38935 993 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 ERVK-24P63145 666 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 MORC3Q14149 939 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 LPIN1Q14693 890 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZNF124Q15973 351 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TIGD2Q4W5G0 525 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 USP50Q70EL3 339 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 CREG2Q8IUH2 290 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 KSR1Q8IVT5 923 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 NKX2-3Q8TAU0 364 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 NLRP7Q8WX94 980 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 DGCR14Q96DF8 476 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 RAB17Q9H0T7 212 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 DDX18Q9NVP1 670 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 TAS2R7Q9NYW3 318 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SENP1Q9P0U3 644 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SOX13Q9UN79 622 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 POLHQ9Y253 713 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 STK38LQ9Y2H1 464 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 REXO2Q9Y3B8 237 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 CPDO75976 1380 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ADGRF5Q8IZF2 1346 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 MYO3BQ8WXR4 1341 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 hCG_1642624A0A1W2PR95 340 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TSPY2A6NKD2 308 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 SYCE1LA8MT33 242 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RSPH10B2B2RC85 870 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 H3BQV1 296 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 IFRD1O00458 451 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 SLC9A3R1O14745 358 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 SULT1B1O43704 296 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZC3H11AO75152 810 aaKnown RBP eCLIP5.53□□□□□ -1.52
HERC4-205ENST00000412272 CTDNEP1O95476 244 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RSPH10BP0C881 870 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TSPY3P0CV98 308 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TSPY8P0CW00 308 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PFKFB1P16118 471 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 NKX2-5P52952 324 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PRAMEP78395 509 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TSPY1Q01534 308 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 TAGLNQ01995 201 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 ENPEPQ07075 957 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 WDR72Q3MJ13 1102 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 Q3ZCU0 254 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 VWA3BQ502W6 1294 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZCWPW2Q504Y3 356 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 ZC3H12BQ5HYM0 836 aaKnown RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 ERMARDQ5T6L9 678 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 IFFO2Q5TF58 517 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 HAUS3Q68CZ6 603 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 FAM180BQ6P0A1 224 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 DCDC5Q6ZRR9 648 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CCDC84Q86UT8 332 aaPredicted RBP5.53□□□□□ -1.52
HERC4-205ENST00000412272 PASD1Q8IV76 773 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 IFNL3Q8IZI9 196 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 RNF169Q8NCN4 708 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 CEP70Q8NHQ1 597 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PIGOQ8TEQ8 1089 aa5.53□□□□□ -1.52
HERC4-205ENST00000412272 PHF12Q96QT6 1004 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms