RNA–Protein interactions for RNA: ENST00000412145.5

PTPN3-203, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,765 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-203ENST00000412145 KIF1BO60333 1816 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ASNA1O43681 348 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 TAF5LO75529 589 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 GGCXP38435 758 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ACADSBP45954 432 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 PRKAA2P54646 552 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 RAD23AP54725 363 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 HSPH1Q92598 858 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 SERHL2Q9H4I8 314 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 SERHLQ9NQF3 203 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 KRT84Q9NSB2 600 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 FBXL5Q9UKA1 691 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 USP1O94782 785 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ALDH1A1P00352 501 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 HIRAP54198 1017 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 SLC20A1Q8WUM9 679 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 CLDN3O15551 220 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 PDE5AO76074 875 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 SLC2A3P11169 496 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 GTF2IP78347 998 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 DOK7Q18PE1 504 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 UHMK1Q8TAS1 419 aaKnown RBP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 CYGBQ8WWM9 190 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 TRABDQ9H4I3 376 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 HERC5Q9UII4 1024 aaKnown RBP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 GRID1Q9ULK0 1009 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 TMCC3Q9ULS5 477 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 CDK12Q9NYV4 1490 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ENC1O14682 589 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 BBOX1O75936 387 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 GPS1Q13098 491 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 CDC73Q6P1J9 531 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 INPP5DQ92835 1189 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 FAM210AQ96ND0 272 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ABCB11O95342 1321 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 FTCDO95954 541 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 IL6P05231 212 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ZAP70P43403 619 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 RAB2AP61019 212 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 KRT31Q15323 416 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 TTC39BQ5VTQ0 682 aaPredicted RBP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 FBXO38Q6PIJ6 1188 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 KRT77Q7Z794 578 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 NLGN1Q8N2Q7 840 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 EXD1Q8NHP7 514 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 ARHGEF26Q96DR7 871 aa7.74□□□□□ -1.17
PTPN3-203ENST00000412145 MTIF3Q9H2K0 278 aaKnown RBP7.74□□□□□ -1.17
PTPN3-203ENST00000412145 PALMO75781 387 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 NR3C1P04150 777 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 WARSP23381 471 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 ZCCHC8Q6NZY4 707 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 FOXP4Q8IVH2 680 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 C17orf53Q8N3J3 647 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 PDCD6IPQ8WUM4 868 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 MTERF3Q96E29 417 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 ZNF594Q96JF6 807 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 MMADHCQ9H3L0 296 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 TMEM94Q12767 1356 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 GSPT1P15170 499 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 HOXC8P31273 242 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 IL12RB1P42701 662 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 PDAP1Q13442 181 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 THEMIS2Q5TEJ8 643 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 IYDQ6PHW0 289 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 CCDC137Q6PK04 289 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 CHMP1BQ7LBR1 199 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 OOSP2Q86WS3 158 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 ZNF483Q8TF39 744 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 L3MBTL3Q96JM7 780 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 TSEN34Q9BSV6 310 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 SLITRK2Q9H156 845 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 RGS18Q9NS28 235 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 TJP2Q9UDY2 1190 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 SERPINB13Q9UIV8 391 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 TAF4O00268 1085 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 P4HA2O15460 535 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 SOAT2O75908 522 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 ALDH1A2O94788 518 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 PAX3P23760 479 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 S100GP29377 79 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 IFNGR2P38484 337 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 BTDP43251 543 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 GPC3P51654 580 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 COPAP53621 1224 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 PDIA2Q13087 525 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 CTTNQ14247 550 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 ATAD3BQ5T9A4 648 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 TRIQKQ629K1 86 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 GADL1Q6ZQY3 521 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 CCDC60Q8IWA6 550 aaPredicted RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 RBM46Q8TBY0 533 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 EXT2Q93063 718 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 COQ7Q99807 217 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 NGRNQ9NPE2 291 aaKnown RBP7.73□□□□□ -1.17
PTPN3-203ENST00000412145 FKBP14Q9NWM8 211 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 PAK5Q9P286 719 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 PI4KBQ9UBF8 816 aa7.73□□□□□ -1.17
PTPN3-203ENST00000412145 VAV3Q9UKW4 847 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms