RNA–Protein interactions for RNA: ENST00000412056.5

CPNE1-206, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 998 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-206ENST00000412056 NFIL3Q16649 462 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 TIGD5Q53EQ6 642 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 CEP135Q66GS9 1140 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 LMBRD2Q68DH5 695 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-206ENST00000412056 CENPPQ6IPU0 288 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 KLHL10Q6JEL2 608 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 RNF168Q8IYW5 571 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-206ENST00000412056 TRIML1Q8N9V2 468 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 BEST2Q8NFU1 509 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 DDX27Q96GQ7 796 aaKnown RBP15.12■□□□□ 0.01
CPNE1-206ENST00000412056 TCF25Q9BQ70 676 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 HERC2P3Q9BVR0 1158 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 GPR62Q9BZJ7 368 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 ENTPD7Q9NQZ7 604 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 C2CD2Q9Y426 696 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 PTPRJQ12913 1337 aa15.12■□□□□ 0.01
CPNE1-206ENST00000412056 PSMA7O14818 248 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 PPEF2O14830 753 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 TADA2AO75478 443 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 SOD2P04179 222 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 CCNE1P24864 410 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 RPL9P32969 192 aaKnown RBP15.11■□□□□ 0.01
CPNE1-206ENST00000412056 BRCC3P46736 316 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 TFAMQ00059 246 aaKnown RBP15.11■□□□□ 0.01
CPNE1-206ENST00000412056 STIM1Q13586 685 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 MYBPC2Q14324 1141 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 PSMD6Q15008 389 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 CCDC85BQ15834 202 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-206ENST00000412056 EDRF1Q3B7T1 1238 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 TCEAL5Q5H9L2 206 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 DCLRE1AQ6PJP8 1040 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 TAS1R1Q7RTX1 841 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 TMC7Q7Z402 723 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 ADGRD2Q7Z7M1 963 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 MAFAQ8NHW3 353 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-206ENST00000412056 PLEKHO2Q8TD55 490 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 MICAL1Q8TDZ2 1067 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 TMEM174Q8WUU8 243 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 AUTS2Q8WXX7 1259 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 PPM1EQ8WY54 764 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 NSUN3Q9H649 340 aaKnown RBP15.11■□□□□ 0.01
CPNE1-206ENST00000412056 CTNND2Q9UQB3 1225 aa15.11■□□□□ 0.01
CPNE1-206ENST00000412056 CTSAP10619 480 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 CA8P35219 290 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 PPP1R2P41236 205 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 SURF1Q15526 300 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 ANKRD40Q6AI12 368 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 NT5DC4Q86YG4 428 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 OR5B17Q8NGF7 314 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 NELFBQ8WX92 580 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 DHTKD1Q96HY7 919 aaPredicted RBP15.1■□□□□ 0.01
CPNE1-206ENST00000412056 B3GALT6Q96L58 329 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 MFSD14AQ96MC6 490 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 CGRRF1Q99675 332 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 TSG101Q99816 390 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 MTMR12Q9C0I1 747 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 GZF1Q9H116 711 aaPredicted RBP15.1■□□□□ 0.01
CPNE1-206ENST00000412056 DPP3Q9NY33 737 aa15.1■□□□□ 0.01
CPNE1-206ENST00000412056 SF3B1O75533 1304 aaKnown RBP eCLIP15.1■□□□□ 0.013e-7■■■■■ 90.2
CPNE1-206ENST00000412056 MTCL1Q9Y4B5 1905 aaKnown RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 BRWD1Q9NSI6 2320 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 ANO9A1A5B4 782 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 HIDE1A8MVS5 230 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 I3L4J1 428 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 AKAP3O75969 853 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 TMEM191BP0C7N4 346 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 DLATP10515 647 aaKnown RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 RPL13P26373 211 aaKnown RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 GLUD2P49448 558 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 ADAM9Q13443 819 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 SMC1AQ14683 1233 aaKnown RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 C9orf57Q5W0N0 161 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 SCARA3Q6AZY7 606 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 PDE12Q6L8Q7 609 aaKnown RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 RBM43Q6ZSC3 357 aaKnown RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 C1orf127Q8N9H9 656 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 CCDC127Q96BQ5 260 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 EEF2KMTQ96G04 330 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 FNBP1Q96RU3 617 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 INTS13Q9NVM9 706 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 TMEM63CQ9P1W3 806 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 FRMD4BQ9Y2L6 1034 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 NUB1Q9Y5A7 615 aa15.09■□□□□ 0.01
CPNE1-206ENST00000412056 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.09■□□□□ 0.01
CPNE1-206ENST00000412056 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 C2orf71A6NGG8 1288 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 C2CD2LO14523 706 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 CXCL14O95715 111 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 URODP06132 367 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 GTF2F1P35269 517 aaKnown RBP eCLIP15.08■□□□□ 06e-10■■■□□ 14.7
CPNE1-206ENST00000412056 STX17P56962 302 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 LRRC63Q05C16 580 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 HYAL1Q12794 435 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 ELAVL2Q12926 359 aaKnown RBP15.08■□□□□ 0
CPNE1-206ENST00000412056 PAK1Q13153 545 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 PTPN14Q15678 1187 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 CCDC183Q5T5S1 534 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 FAM171A1Q5VUB5 890 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 TTI2Q6NXR4 508 aa15.08■□□□□ 0
CPNE1-206ENST00000412056 RBM23Q86U06 439 aaKnown RBP15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms