RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 GPD1LQ8N335 351 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 MRPL17Q9NRX2 175 aaKnown RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 RBAKQ9NYW8 714 aaPredicted RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 CLASP2O75122 1294 aaKnown RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 URODP06132 367 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 SPATA31D3P0C874 917 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 NDUFV1P49821 464 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 PSMD2Q13200 908 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 TMEM132DQ14C87 1099 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 BMT2Q1RMZ1 405 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 KIAA0319Q5VV43 1072 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 SPATA31D4Q6ZUB0 917 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 RNF168Q8IYW5 571 aaPredicted RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 FEZF2Q8TBJ5 459 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 PABPC5Q96DU9 382 aaKnown RBP13□□□□□ -0.33
NEDD1-202ENST00000411739 HERC2P3Q9BVR0 1158 aa13□□□□□ -0.33
NEDD1-202ENST00000411739 SF3B1O75533 1304 aaKnown RBP eCLIP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 LILRB3O75022 631 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 ADRB2P07550 413 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 EPCAMP16422 314 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 TKTP29401 623 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 GLUD2P49448 558 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 UBE2HP62256 183 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 TFAMQ00059 246 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 USP41Q3LFD5 358 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 PDE12Q6L8Q7 609 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 PPP2R3CQ969Q6 453 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 CCDC47Q96A33 483 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 KLHL5Q96PQ7 755 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 CHST7Q9NS84 486 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 CDH22Q9UJ99 828 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 UBQLN1Q9UMX0 589 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 NUB1Q9Y5A7 615 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 BIN1O00499 593 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 KLRC2P26717 231 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 BMS1Q14692 1282 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 CTC1Q2NKJ3 1217 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 HS2ST1Q7LGA3 356 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 PALB2Q86YC2 1186 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 EFHBQ8N7U6 833 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 EEF2KMTQ96G04 330 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 TIGD1Q96MW7 591 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 UROC1Q96N76 676 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 POP1Q99575 1024 aaKnown RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 KCTD10Q9H3F6 313 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 CLEC1BQ9P126 229 aa12.99□□□□□ -0.33
NEDD1-202ENST00000411739 TIMM13Q9Y5L4 95 aaPredicted RBP12.99□□□□□ -0.33
NEDD1-202ENST00000411739 UBE4BO95155 1302 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 TEX28O15482 410 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 LDHAP00338 332 aaKnown RBP12.98□□□□□ -0.33
NEDD1-202ENST00000411739 MCM4P33991 863 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 DSG1Q02413 1049 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 SPATA1Q5VX52 437 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 BRSK2Q8IWQ3 736 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 C12orf76Q8N812 135 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-202ENST00000411739 SMARCE1Q969G3 411 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 CCDC127Q96BQ5 260 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 DDX27Q96GQ7 796 aaKnown RBP12.98□□□□□ -0.33
NEDD1-202ENST00000411739 CCDC34Q96HJ3 373 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 TTPALQ9BTX7 342 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 HCFC2Q9Y5Z7 792 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 C5orf42Q9H799 3197 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 PTPRJQ12913 1337 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 CARNS1A5YM72 827 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 ZNF233A6NK53 670 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 ADAM12O43184 909 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 CDR1P51861 262 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 KCNB1Q14721 858 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 BEST2Q8NFU1 509 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.98□□□□□ -0.33
NEDD1-202ENST00000411739 ASB7Q9H672 318 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 DPP3Q9NY33 737 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 COG5Q9UP83 839 aa12.98□□□□□ -0.33
NEDD1-202ENST00000411739 ANK1P16157 1881 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 SPTLC1O15269 473 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 EXOC3O60645 756 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 DLATP10515 647 aaKnown RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 RPL9P32969 192 aaKnown RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 CASP4P49662 377 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 MRPS5P82675 430 aaKnown RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 SNRNP35Q16560 246 aaKnown RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 CD302Q8IX05 232 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 XXYLT1Q8NBI6 393 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 OR5B17Q8NGF7 314 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 LNX1Q8TBB1 728 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 ASB2Q96Q27 587 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 MAN1B1Q9UKM7 699 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 IRAK3Q9Y616 596 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 TCF20Q9UGU0 1960 aaKnown RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 PDCD11Q14690 1871 aaKnown RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 IL18RAPO95256 599 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 SMC2O95347 1197 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 WEE2P0C1S8 567 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 PRCPP42785 496 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 COL19A1Q14993 1142 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 C9orf57Q5W0N0 161 aa12.97□□□□□ -0.33
NEDD1-202ENST00000411739 NECAB3Q96P71 396 aaPredicted RBP12.97□□□□□ -0.33
NEDD1-202ENST00000411739 EMILIN2Q9BXX0 1053 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms