RNA–Protein interactions for RNA: ENST00000411464.3

MRPL55-220, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-220ENST00000411464 TARSP26639 723 aaKnown RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 PEX3P56589 373 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 SOX4Q06945 474 aaPredicted RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ADCY1Q08828 1119 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 GNL2Q13823 731 aaKnown RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ECM1Q16610 540 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 RSPO4Q2I0M5 234 aaPredicted RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ZNF568Q3ZCX4 644 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 XKR4Q5GH76 650 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 TTC38Q5R3I4 469 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ALKAL1Q6UXT8 129 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 TCEAL8Q8IYN2 117 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 CEP120Q8N960 986 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ZBTB44Q8NCP5 570 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ACAP3Q96P50 834 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ACO2Q99798 780 aaKnown RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 MRPL4Q9BYD3 311 aaKnown RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 CDT1Q9H211 546 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 BRD9Q9H8M2 597 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 ZFP14Q9HCL3 533 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 DDX19AQ9NUU7 478 aaKnown RBP18.32■□□□□ 0.52
MRPL55-220ENST00000411464 STK24Q9Y6E0 443 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 CACNA1AO00555 2505 aa18.32■□□□□ 0.52
MRPL55-220ENST00000411464 WDR27A2RRH5 827 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 MAN2B1O00754 1011 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 MICAL2O94851 1124 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 CENPBP07199 599 aaPredicted RBP18.31■□□□□ 0.52
MRPL55-220ENST00000411464 SDHBP21912 280 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 RPL9P32969 192 aaKnown RBP18.31■□□□□ 0.52
MRPL55-220ENST00000411464 NPTX2P47972 431 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 FXR2P51116 673 aaKnown RBP eCLIP18.31■□□□□ 0.52
MRPL55-220ENST00000411464 PDIA5Q14554 519 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 CYP4A22Q5TCH4 519 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 PDZD4Q76G19 769 aaPredicted RBP18.31■□□□□ 0.52
MRPL55-220ENST00000411464 ELMOD1Q8N336 334 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 DNASE1L2Q92874 299 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 TRMT61BQ9BVS5 477 aaKnown RBP18.31■□□□□ 0.52
MRPL55-220ENST00000411464 TMEM134Q9H6X4 195 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 PTPRHQ9HD43 1115 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 DNM3Q9UQ16 869 aa18.31■□□□□ 0.52
MRPL55-220ENST00000411464 PHLPP2Q6ZVD8 1323 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 TBC1D4O60343 1298 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 MCF2P10911 925 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 KCNE1P15382 129 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 TRAPPC10P48553 1259 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 DMP1Q13316 513 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 GRM2Q14416 872 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 CTXN3Q4LDR2 81 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 FAM78AQ5JUQ0 283 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 PRSS36Q5K4E3 855 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 TPGS2Q68CL5 300 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 IQCEQ6IPM2 695 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 TSSK4Q6SA08 328 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 IRF7Q92985 503 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 TCEAL4Q96EI5 215 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 ZNF512Q96ME7 567 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 ZMAT2Q96NC0 199 aaKnown RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 TARS2Q9BW92 718 aaKnown RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 FAM126AQ9BYI3 521 aaPredicted RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 RAB34Q9BZG1 259 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 KMT5AQ9NQR1 393 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 FBXL5Q9UKA1 691 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 NOL7Q9UMY1 257 aaKnown RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 RBM19Q9Y4C8 960 aaKnown RBP18.3■□□□□ 0.52
MRPL55-220ENST00000411464 INSL5Q9Y5Q6 135 aa18.3■□□□□ 0.52
MRPL55-220ENST00000411464 EIF5BO60841 1220 aaKnown RBP18.29■□□□□ 0.52
MRPL55-220ENST00000411464 LILRB5O75023 590 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 SEC24AO95486 1093 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 ST3GAL1Q11201 340 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 MTAPQ13126 283 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 FZD5Q13467 585 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 MRPL58Q14197 206 aaKnown RBP18.29■□□□□ 0.52
MRPL55-220ENST00000411464 POTEHQ6S545 545 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 C4orf32Q8N8J7 132 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 APPL2Q8NEU8 664 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 SNX29Q8TEQ0 813 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 NELL1Q92832 810 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 DRC1Q96MC2 740 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 EPC1Q9H2F5 836 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 NDRG2Q9UN36 371 aaKnown RBP18.29■□□□□ 0.52
MRPL55-220ENST00000411464 LIMCH1Q9UPQ0 1083 aa18.29■□□□□ 0.52
MRPL55-220ENST00000411464 SMG5Q9UPR3 1016 aaKnown RBP18.29■□□□□ 0.52
MRPL55-220ENST00000411464 HIP1RO75146 1068 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 FCARP24071 287 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 MARCKSP29966 332 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-220ENST00000411464 MCM4P33991 863 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 NRLP54845 237 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 PPP2R5DQ14738 602 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 ZNF280DQ6N043 979 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 MPZL3Q6UWV2 235 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 CCDC83Q8IWF9 413 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 FBXO18Q8NFZ0 1043 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 SMARCD2Q92925 531 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 C18orf25Q96B23 403 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-220ENST00000411464 ASB16Q96NS5 453 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 LLPHQ9BRT6 129 aaKnown RBP18.28■□□□□ 0.52
MRPL55-220ENST00000411464 PRMT8Q9NR22 394 aaPredicted RBP18.28■□□□□ 0.52
MRPL55-220ENST00000411464 CNTN3Q9P232 1028 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 ARHGAP28Q9P2N2 729 aa18.28■□□□□ 0.52
MRPL55-220ENST00000411464 MAFFQ9ULX9 164 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms