RNA–Protein interactions for RNA: ENST00000410466.1

RNU6-554P-201, Transcript of RNA, U6 small nuclear 554, pseudogene, humanhuman

BASIC

Gene RNU6-554P, Length 106 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-554P-201ENST00000410466 NHLRC4P0CG21 123 aaPredicted RBP1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 GCSHP23434 173 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 MRGPRG-AS1Q2M3A8 158 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 TNNI3KQ59H18 835 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 TIGD7Q6NT04 549 aaPredicted RBP1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 ZNF549Q6P9A3 640 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 ANKS3Q6ZW76 656 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 DRC7Q8IY82 874 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 ZNF654Q8IZM8 581 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 CEP95Q96GE4 821 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 SLITRK1Q96PX8 696 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 BOCQ9BWV1 1114 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 PODXL2Q9NZ53 605 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 SELENONQ9NZV5 590 aa1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 DNMT3BQ9UBC3 853 aaKnown RBP1.47□□□□□ -2.17
RNU6-554P-201ENST00000410466 A0A1W2PNU3 283 aaPredicted RBP1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 B4DGG1 531 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 ADAMTS3O15072 1205 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 EBLN1P0CF75 366 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 PSG1P11464 419 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 TCEA1P23193 301 aaKnown RBP1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 FLT3LGP49771 235 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 KIF11P52732 1056 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 RAP2BP61225 183 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 FANCCQ00597 558 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 YOD1Q5VVQ6 348 aaPredicted RBP1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 FOXB2Q5VYV0 432 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 TSHZ1Q6ZSZ6 1077 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 KANSL1Q7Z3B3 1105 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 C7orf31Q8N865 590 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 SLC35B2Q8TB61 432 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 LPIN2Q92539 896 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 SEC16BQ96JE7 1060 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 C5orf34Q96MH7 638 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 TMEM204Q9BSN7 226 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 CELF4Q9BZC1 486 aaKnown RBP1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 FAM234AQ9H0X4 552 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 METTL5Q9NRN9 209 aaKnown RBP1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 INTS13Q9NVM9 706 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 ICAM5Q9UMF0 924 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 COQ6Q9Y2Z9 468 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 PCDHB6Q9Y5E3 794 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 PCDHA9Q9Y5H5 950 aa1.46□□□□□ -2.18
RNU6-554P-201ENST00000410466 ZBTB7CA1YPR0 619 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 PRAMEF4O60810 478 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 ITGA10O75578 1167 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 KRT37O76014 449 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 ZNF432O94892 652 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 GJB6O95452 261 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 MFSD14BQ5SR56 506 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 ZNF324BQ6AW86 544 aaPredicted RBP1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 KIAA1841Q6NSI8 718 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 LMBR1LQ6UX01 489 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 SND1Q7KZF4 910 aaKnown RBP eCLIP1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 SH2D6Q7Z4S9 175 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 PIM3Q86V86 326 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 MCF2L2Q86YR7 1114 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 C2orf69Q8N8R5 385 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 CDYL2Q8N8U2 506 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 MYCBPAPQ8TBZ2 947 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 CUL5Q93034 780 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 MED15Q96RN5 788 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 SENP6Q9GZR1 1112 aaPredicted RBP1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 PCIF1Q9H4Z3 704 aa1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 SLTMQ9NWH9 1034 aaKnown RBP eCLIP1.45□□□□□ -2.18
RNU6-554P-201ENST00000410466 WDR17Q8IZU2 1322 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 ACOT8O14734 319 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 NRP2O60462 931 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 PRPF6O94906 941 aaKnown RBP1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 PCDH8O95206 1070 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 CRTAMO95727 393 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 NGFRP08138 427 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 XPAP23025 273 aaPredicted RBP1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 NRG3P56975 720 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 RPL36AP83881 106 aaKnown RBP1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 E2F1Q01094 437 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 EPHA7Q15375 998 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 KRTAP24-1Q3LI83 254 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 RRP12Q5JTH9 1297 aaKnown RBP1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 SLC29A4Q7RTT9 530 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 PELI3Q8N2H9 469 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 PNLDC1Q8NA58 520 aaKnown RBP1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 C8orf58Q8NAV2 365 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 SLC30A5Q8TAD4 765 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 TMEM125Q96AQ2 219 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 REPS1Q96D71 796 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 ZC3H10Q96K80 434 aaKnown RBP1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 FAM118BQ9BPY3 351 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 MYL10Q9BUA6 226 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 KLHL13Q9P2N7 655 aa1.44□□□□□ -2.18
RNU6-554P-201ENST00000410466 A0A1W2PR48 441 aa1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 CXorf49A8MYA2 514 aaPredicted RBP1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 PATL2C9JE40 543 aaKnown RBP1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 GASTP01350 101 aa1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 CYP17A1P05093 508 aa1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 ZBTB48P10074 688 aaPredicted RBP1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 FGF3P11487 239 aaPredicted RBP1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 PLA2G2AP14555 144 aa1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 ATP5F1P24539 256 aaPredicted RBP1.43□□□□□ -2.18
RNU6-554P-201ENST00000410466 GAS1P54826 345 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms