RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 KCNN1Q92952 543 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 PHOX2BQ99453 314 aa16.11■□□□□ 0.17
CBX3-203ENST00000409747 PDCD11Q14690 1871 aaKnown RBP16.1■□□□□ 0.17
CBX3-203ENST00000409747 I3L4J1 428 aa16.1■□□□□ 0.17
CBX3-203ENST00000409747 VARS2Q5ST30 1063 aaKnown RBP16.1■□□□□ 0.17
CBX3-203ENST00000409747 GPBP1Q86WP2 473 aa16.1■□□□□ 0.17
CBX3-203ENST00000409747 ZBTB45Q96K62 511 aaPredicted RBP16.1■□□□□ 0.17
CBX3-203ENST00000409747 PLEKHA5Q9HAU0 1116 aa16.1■□□□□ 0.17
CBX3-203ENST00000409747 FAM86C1Q9NVL1 165 aa16.1■□□□□ 0.17
CBX3-203ENST00000409747 KCNH3Q9ULD8 1083 aa16.1■□□□□ 0.17
CBX3-203ENST00000409747 NUMBLQ9Y6R0 609 aa16.1■□□□□ 0.17
CBX3-203ENST00000409747 FAM13AO94988 1023 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 CLTAP09496 248 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 NPR3P17342 541 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 PDCP20941 246 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 IGFBP6P24592 240 aaPredicted RBP16.09■□□□□ 0.17
CBX3-203ENST00000409747 ELF1P32519 619 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 LIG4P49917 911 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 HAUS6Q7Z4H7 955 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 APPL2Q8NEU8 664 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 ZNF461Q8TAF7 563 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 REEP2Q9BRK0 252 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 PARVGQ9HBI0 331 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 SLC2A4RGQ9NR83 387 aa16.09■□□□□ 0.17
CBX3-203ENST00000409747 NPHP3-ACAD11A0A0J9YXS1 232 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 STK25O00506 426 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 LRG1P02750 347 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 KRT18P05783 430 aaKnown RBP16.08■□□□□ 0.17
CBX3-203ENST00000409747 MCM4P33991 863 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 ROR1Q01973 937 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 CACNB1Q02641 598 aaPredicted RBP16.08■□□□□ 0.17
CBX3-203ENST00000409747 SLC10A6Q3KNW5 377 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 PABPC1LQ4VXU2 614 aaKnown RBP16.08■□□□□ 0.17
CBX3-203ENST00000409747 ARSHQ5FYA8 562 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 RSPO2Q6UXX9 243 aaPredicted RBP16.08■□□□□ 0.17
CBX3-203ENST00000409747 CCDC105Q8IYK2 499 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 FGF13Q92913 245 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 C18orf25Q96B23 403 aaPredicted RBP16.08■□□□□ 0.17
CBX3-203ENST00000409747 SUSD3Q96L08 255 aa16.08■□□□□ 0.17
CBX3-203ENST00000409747 CACNA1HO95180 2353 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 K7ENM7 598 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 PRRG1O14668 218 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 HNRNPDLO14979 420 aaKnown RBP16.08■□□□□ 0.16
CBX3-203ENST00000409747 XPOTO43592 962 aaKnown RBP16.08■□□□□ 0.16
CBX3-203ENST00000409747 TBCAO75347 108 aaKnown RBP16.08■□□□□ 0.16
CBX3-203ENST00000409747 CXCL8P10145 99 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 NTHL1P78549 312 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 PPP2R3AQ06190 1150 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 SF3A1Q15459 793 aaKnown RBP16.08■□□□□ 0.16
CBX3-203ENST00000409747 ZNF280DQ6N043 979 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 MYCT1Q8N699 235 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 GPR152Q8TDT2 470 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 TSPAN18Q96SJ8 248 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 ARHGEF3Q9NR81 526 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 CA14Q9ULX7 337 aa16.08■□□□□ 0.16
CBX3-203ENST00000409747 ARHGEF37A1IGU5 675 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 VPS37CA5D8V6 355 aaPredicted RBP16.07■□□□□ 0.16
CBX3-203ENST00000409747 KRBA1A5PL33 1030 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 PROB1E7EW31 1015 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 GFRA3O60609 400 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 ABLIM3O94929 683 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 ATF2P15336 505 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 PLCG1P19174 1290 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 ZNF131P52739 623 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 CUL4AQ13619 759 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 DHX8Q14562 1220 aaKnown RBP16.07■□□□□ 0.16
CBX3-203ENST00000409747 SEZ6Q53EL9 994 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 TPGS2Q68CL5 300 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 RAD54LQ92698 747 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 DNMT3BQ9UBC3 853 aaKnown RBP16.07■□□□□ 0.16
CBX3-203ENST00000409747 MAFFQ9ULX9 164 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 TBX20Q9UMR3 447 aa16.07■□□□□ 0.16
CBX3-203ENST00000409747 UBQLN1Q9UMX0 589 aaKnown RBP16.07■□□□□ 0.16
CBX3-203ENST00000409747 MRPS23Q9Y3D9 190 aaKnown RBP16.07■□□□□ 0.16
CBX3-203ENST00000409747 WDR27A2RRH5 827 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 MEFVO15553 781 aaPredicted RBP16.06■□□□□ 0.16
CBX3-203ENST00000409747 TRAK2O60296 914 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 PIGRP01833 764 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 CYP3A5P20815 502 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 MARCKSP29966 332 aaPredicted RBP16.06■□□□□ 0.16
CBX3-203ENST00000409747 MRPL58Q14197 206 aaKnown RBP16.06■□□□□ 0.16
CBX3-203ENST00000409747 CTXN3Q4LDR2 81 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 PHLDB3Q6NSJ2 640 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 ITFG1Q8TB96 612 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 LARP4BQ92615 738 aaKnown RBP16.06■□□□□ 0.16
CBX3-203ENST00000409747 FGF14Q92915 247 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 KIF12Q96FN5 646 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 SHDQ96IW2 340 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 OXCT2Q9BYC2 517 aaPredicted RBP16.06■□□□□ 0.16
CBX3-203ENST00000409747 TBC1D17Q9HA65 648 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 AVENQ9NQS1 362 aaPredicted RBP16.06■□□□□ 0.16
CBX3-203ENST00000409747 BLOC1S4Q9NUP1 217 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 HCFC1R1Q9NWW0 138 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 TUBGCP4Q9UGJ1 667 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 FBXL5Q9UKA1 691 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 PCDHB8Q9UN66 801 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 MYO15AQ9UKN7 3530 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 MYH15Q9Y2K3 1946 aa16.06■□□□□ 0.16
CBX3-203ENST00000409747 TTC26A0AVF1 554 aa16.05■□□□□ 0.16
CBX3-203ENST00000409747 OGTO15294 1046 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms