RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 FAM189A1O60320 539 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 HSP90AA1P07900 732 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 TKTP29401 623 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 OR1D2P34982 312 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 MTMR3Q13615 1198 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 STAMQ92783 540 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 PIDD1Q9HB75 910 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 SEL1LQ9UBV2 794 aa21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 PDCD11Q14690 1871 aaKnown RBP21.38■■□□□ 1.01
TSPAN4-209ENST00000409543 PPP6R2O75170 966 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 TNFSF9P41273 254 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 STAT6P42226 847 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 ZBTB6Q15916 424 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 ZC2HC1CQ53FD0 456 aaPredicted RBP21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 SLC39A4Q6P5W5 647 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 ZNF720Q7Z2F6 126 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 SFR1Q86XK3 245 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 UBALD2Q8IYN6 164 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 DNAJC19Q96DA6 116 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 TSPAN18Q96SJ8 248 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 PANK2Q9BZ23 570 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 TFIP11Q9UBB9 837 aaKnown RBP21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 NUB1Q9Y5A7 615 aa21.37■■□□□ 1.01
TSPAN4-209ENST00000409543 CLUHO75153 1309 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 MYH15Q9Y2K3 1946 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 A0A087X0B3 334 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 SYN3O14994 580 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 SPTLC2O15270 562 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 ADRB2P07550 413 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 HNRNPA1P09651 372 aaKnown RBP eCLIP21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 GAP43P17677 238 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 PPP2R3AQ06190 1150 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 ENOX2Q16206 610 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 ZBTB41Q5SVQ8 909 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 LIN9Q5TKA1 542 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 RSPO2Q6UXX9 243 aaPredicted RBP21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 PBXIP1Q96AQ6 731 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 HVCN1Q96D96 273 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 KIF12Q96FN5 646 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 ASIC4Q96FT7 647 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 MSTO1Q9BUK6 570 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 RPF1Q9H9Y2 349 aaKnown RBP21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 TUBGCP4Q9UGJ1 667 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 CDY1Q9Y6F8 540 aa21.36■■□□□ 1.01
TSPAN4-209ENST00000409543 LACTBL1A8MY62 500 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 ANKRD63C9JTQ0 380 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 YEATS4O95619 227 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 ASGR2P07307 311 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 C8AP07357 584 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 ZSCAN22P10073 491 aaPredicted RBP21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 CYP3A5P20815 502 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 LRPAP1P30533 357 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 HOXA9P31269 272 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 VARS2Q5ST30 1063 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 SLFN12LQ6IEE8 588 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 RTL10Q7L3V2 364 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 CD302Q8IX05 232 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 SUSD3Q96L08 255 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 STRA6Q9BX79 667 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 CPSF3Q9UKF6 684 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 UBQLN1Q9UMX0 589 aaKnown RBP21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 STYXL1Q9Y6J8 313 aa21.35■■□□□ 1.01
TSPAN4-209ENST00000409543 XPOTO43592 962 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 N4BP1O75113 896 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 PPP1R37O75864 691 aa21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 SPAG1Q07617 926 aa21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 MRPL58Q14197 206 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 UVSSAQ2YD98 709 aa21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 PPM1LQ5SGD2 360 aa21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 AXDND1Q5T1B0 1012 aaPredicted RBP21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 SLC8B1Q6J4K2 584 aa21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 MRPL44Q9H9J2 332 aaKnown RBP21.34■■□□□ 1.01
TSPAN4-209ENST00000409543 H7C4K7 107 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 TBC1D4O60343 1298 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 GBP2P32456 591 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 MCM4P33991 863 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 FOXD4L5Q5VV16 416 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 ADALQ6DHV7 355 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 PDILTQ8N807 584 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 FOXD4L4Q8WXT5 416 aaPredicted RBP21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 KCNH6Q9H252 994 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 OLFML3Q9NRN5 406 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.33■■□□□ 1.015e-7■■■■□ 26.4
TSPAN4-209ENST00000409543 EPS15L1Q9UBC2 864 aa21.33■■□□□ 1.01
TSPAN4-209ENST00000409543 FRMD3A2A2Y4 597 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 CUTAO60888 179 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 F13A1P00488 732 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 POU2F2P09086 479 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 PLA2G5P39877 138 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 FBXL6Q8N531 539 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 APPL2Q8NEU8 664 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 ZNF461Q8TAF7 563 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 SLC7A14Q8TBB6 771 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 MYADMQ96S97 322 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 KCNK12Q9HB15 430 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 IGSF9Q9P2J2 1179 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 AGO2Q9UKV8 859 aaKnown RBP21.32■■□□□ 1
TSPAN4-209ENST00000409543 PCDHB8Q9UN66 801 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 ZNF318Q5VUA4 2279 aa21.32■■□□□ 1
TSPAN4-209ENST00000409543 TISP43B9A030 160 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms