RNA–Protein interactions for RNA: ENST00000409364.3

GTF3C3-202, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GTF3C3, Length 1,736 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-202ENST00000409364 NCK2O43639 380 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ZEB2O60315 1214 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 FAM189A1O60320 539 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 B4GALT4O60513 344 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ZRANB2O95218 330 aaKnown RBP eCLIP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 IL18RAPO95256 599 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 VNN1O95497 513 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 TFRCP02786 760 aaKnown RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CLTAP09496 248 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CHRNB2P17787 502 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ABCB4P21439 1286 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CXCR5P32302 372 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 MBTD1Q05BQ5 628 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CUL2Q13617 745 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NCOA4Q13772 614 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 TAF1CQ15572 869 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CLUL1Q15846 466 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 MAP9Q49MG5 647 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 GJC2Q5T442 439 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ACAD10Q6JQN1 1059 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 RGMBQ6NW40 437 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CC2D1AQ6P1N0 951 aaPredicted RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NOP9Q86U38 636 aaKnown RBP6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 SLC47A2Q86VL8 602 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 LINC01465Q8N7H1 131 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 OR6J1Q8NGC5 347 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NPLOC4Q8TAT6 608 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 SLC20A1Q8WUM9 679 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 FAXDC2Q96IV6 333 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 PI4K2AQ9BTU6 479 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 THAP2Q9H0W7 228 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 IFT122Q9HBG6 1241 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 ABCB6Q9NP58 842 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 NMRK2Q9NPI5 230 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 TAS2R14Q9NYV8 317 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CTTNBP2NLQ9P2B4 639 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 CNTN6Q9UQ52 1028 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 AKT3Q9Y243 479 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 STXBP5LQ9Y2K9 1186 aa6.73□□□□□ -1.33
GTF3C3-202ENST00000409364 A0A087WZ62 844 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 MIF4GDA9UHW6 222 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 KCNK3O14649 394 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 DYNC1LI2O43237 492 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 BUB1BO60566 1050 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 MTA2O94776 668 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ASS1P00966 412 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 TNNC2P02585 160 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 EDN1P05305 212 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 MMP3P08254 477 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 MMEP08473 750 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 MCF2P10911 925 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 HARSP12081 509 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 WNT7BP56706 349 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 FMO1Q01740 532 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 PPFIA1Q13136 1202 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 TRPC3Q13507 836 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 PCBP1Q15365 356 aaKnown RBP eCLIP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF568Q3ZCX4 644 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ZBTB41Q5SVQ8 909 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 TAF3Q5VWG9 929 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 OLFML2BQ68BL8 750 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 LMBRD2Q68DH5 695 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 C17orf99Q6UX52 265 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 TRIM72Q6ZMU5 477 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 SAPCD2Q86UD0 394 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 NT5DC3Q86UY8 548 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ZNF410Q86VK4 478 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 RASAL3Q86YV0 1011 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 THNSL1Q8IYQ7 743 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 OR5B17Q8NGF7 314 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ACTRT1Q8TDG2 376 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 DDX1Q92499 740 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 CCDC102AQ96A19 550 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 TRIM11Q96F44 468 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 HES6Q96HZ4 224 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ANKRD36BP1Q96IX9 119 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 RPS6KC1Q96S38 1066 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 PCDHB18PQ96TA0 734 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 PSMB7Q99436 277 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 FDXACB1Q9BRP7 624 aaPredicted RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ASB7Q9H672 318 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 RPF1Q9H9Y2 349 aaKnown RBP6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 ZFYVE28Q9HCC9 887 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.72□□□□□ -1.333e-6■■■■■ 94.9
GTF3C3-202ENST00000409364 ZNF446Q9NWS9 450 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 UVRAGQ9P2Y5 699 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 GTF3C4Q9UKN8 822 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 Q9Y3F1 56 aa6.72□□□□□ -1.33
GTF3C3-202ENST00000409364 NRCAMQ92823 1304 aa6.71□□□□□ -1.33
GTF3C3-202ENST00000409364 LCTP09848 1927 aa6.71□□□□□ -1.33
GTF3C3-202ENST00000409364 IGF2BP3O00425 579 aaKnown RBP eCLIP6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 CEP104O60308 925 aa6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 CST3P01034 146 aaPredicted RBP6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 CYP1A2P05177 515 aa6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 GJB1P08034 283 aa6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 TMEM191BP0C7N4 346 aa6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 MYBL1P10243 752 aa6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 ACO1P21399 889 aaKnown RBP6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 RGS2P41220 211 aa6.71□□□□□ -1.34
GTF3C3-202ENST00000409364 TNFSF9P41273 254 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms