RNA–Protein interactions for RNA: ENST00000407925.5

LTBP1-204, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-204ENST00000407925 ATP11BQ9Y2G3 1177 aa11.29□□□□□ -0.6
LTBP1-204ENST00000407925 CCDC195A0A1B0GUA6 201 aa11.29□□□□□ -0.6
LTBP1-204ENST00000407925 TRIM28Q13263 835 aaKnown RBP11.29□□□□□ -0.6
LTBP1-204ENST00000407925 ZNF211Q13398 564 aaPredicted RBP11.29□□□□□ -0.6
LTBP1-204ENST00000407925 RSAD1Q9HA92 442 aa11.29□□□□□ -0.6
LTBP1-204ENST00000407925 H2AFY2Q9P0M6 372 aaPredicted RBP11.29□□□□□ -0.6
LTBP1-204ENST00000407925 CDY2AQ9Y6F7 541 aa11.29□□□□□ -0.6
LTBP1-204ENST00000407925 CDY1Q9Y6F8 540 aa11.29□□□□□ -0.6
LTBP1-204ENST00000407925 KIF1CO43896 1103 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SRP72O76094 671 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CYP2C8P10632 490 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SPP2Q13103 211 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 APLFQ8IW19 511 aaPredicted RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CNPY3Q9BT09 278 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 OSBPL1AQ9BXW6 950 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 TDRD3Q9H7E2 651 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 TMEM161AQ9NX61 479 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 A2ML1A8K2U0 1454 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 DFFAO00273 331 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 NPEPPSP55786 919 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CENPCQ03188 943 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 KBTBD12Q3ZCT8 623 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CATSPER3Q86XQ3 398 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CYP4F11Q9HBI6 524 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SCN3BQ9NY72 215 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SEPT3Q9UH03 358 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 COL15A1P39059 1388 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 ARAP3Q8WWN8 1544 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SRGAP2O75044 1071 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CLASP2O75122 1294 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 PRDX5P30044 214 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 YWHABP31946 246 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SULT1E1P49888 294 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 AARS2Q5JTZ9 985 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 CAPRIN2Q6IMN6 1127 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 SEPT12Q8IYM1 358 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 NMRK1Q9NWW6 199 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 ZC3H7BQ9UGR2 993 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 AFF4Q9UHB7 1163 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 KDM6AO15550 1401 aaPredicted RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 C21orf2O43822 256 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 RGS2P41220 211 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 BLVRAP53004 296 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 MRPS15P82914 257 aaKnown RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 PRKCQQ04759 706 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 ARHGEF7Q14155 803 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 ANKRD40Q6AI12 368 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 PLD3Q8IV08 490 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 RDM1Q8NG50 284 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 ZNF526Q8TF50 670 aaPredicted RBP11.28□□□□□ -0.6
LTBP1-204ENST00000407925 PTPRN2Q92932 1015 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 C7orf25Q9BPX7 421 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 TEX13BQ9BXU2 312 aa11.28□□□□□ -0.6
LTBP1-204ENST00000407925 UGGT1Q9NYU2 1555 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 SPATA31E1Q6ZUB1 1445 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 PDS5AQ29RF7 1337 aaKnown RBP11.27□□□□□ -0.6
LTBP1-204ENST00000407925 ATP9BO43861 1147 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 CD2BP2O95400 341 aaKnown RBP11.27□□□□□ -0.6
LTBP1-204ENST00000407925 PTPN21Q16825 1174 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 IER5Q5VY09 327 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 ADCK1Q86TW2 530 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 THOC1Q96FV9 657 aaKnown RBP11.27□□□□□ -0.6
LTBP1-204ENST00000407925 SRPK1Q96SB4 655 aaKnown RBP11.27□□□□□ -0.6
LTBP1-204ENST00000407925 DDX28Q9NUL7 540 aaKnown RBP11.27□□□□□ -0.6
LTBP1-204ENST00000407925 TBC1D23Q9NUY8 699 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 SRP68Q9UHB9 627 aaKnown RBP11.27□□□□□ -0.6
LTBP1-204ENST00000407925 ZNF229Q9UJW7 825 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 GRID1Q9ULK0 1009 aa11.27□□□□□ -0.6
LTBP1-204ENST00000407925 METP08581 1390 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 SNTNA6NMZ2 147 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 KCNN4O15554 427 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 PJA2O43164 708 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 CCDC159P0C7I6 412 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 TCF3P15923 654 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 PDGFRAP16234 1089 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 MDH1P40925 334 aaKnown RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 ARL4DP49703 201 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 NCKAP1LP55160 1127 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 ZNF200P98182 395 aaPredicted RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 WLSQ5T9L3 541 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 DAB2IPQ5VWQ8 1189 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 LDHDQ86WU2 507 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 CCNJLQ8IV13 435 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 ZFP42Q96MM3 310 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 EPN3Q9H201 632 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 FAM47DPA6NHR8 397 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 EVPLLA8MZ36 301 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 PRR23D1E9PI22 279 aaPredicted RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 MEFVO15553 781 aaPredicted RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 GAS2O43903 313 aaKnown RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 SNRPAP09012 282 aaKnown RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 PRR23D2P0DMB1 279 aaPredicted RBP11.27□□□□□ -0.61
LTBP1-204ENST00000407925 MYL2P10916 166 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 PYGMP11217 842 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 MUTP22033 750 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 PNPLA4P41247 253 aa11.27□□□□□ -0.61
LTBP1-204ENST00000407925 HPCAP84074 193 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms