RNA–Protein interactions for RNA: ENST00000407585.5

PACSIN2-205, Transcript of protein kinase C and casein kinase substrate in neurons 2, humanhuman

TSL 1 (best) BASIC

Gene PACSIN2, Length 3,080 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN2-205ENST00000407585 RNF43Q68DV7 783 aa18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 PASD1Q8IV76 773 aa18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 CCDC89Q8N998 374 aa18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 KCNH7Q9NS40 1196 aa18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 RAB20Q9NX57 234 aa18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 SLC5A4Q9NY91 659 aa18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.32■□□□□ 0.52
PACSIN2-205ENST00000407585 MAGEA4P43358 317 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 STAT4Q14765 748 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 LRRC37BQ96QE4 947 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 IDI2Q9BXS1 227 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.31■□□□□ 0.524e-11■■■■■ 51.9
PACSIN2-205ENST00000407585 FBXO28Q9NVF7 368 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 PHTF1Q9UMS5 762 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 ADGRA3Q8IWK6 1321 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 BTAF1O14981 1849 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 POLRMTO00411 1230 aaKnown RBP18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 SORBS3O60504 671 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 ANKLE1Q8NAG6 615 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 GRAMD1AQ96CP6 724 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 MXRA8Q9BRK3 442 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 VPS37BQ9H9H4 285 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 H0Y3Z8 333 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 NAIF1Q69YI7 327 aaPredicted RBP18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 CAPRIN2Q6IMN6 1127 aaKnown RBP18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 PARD3BQ8TEW8 1205 aa18.31■□□□□ 0.52
PACSIN2-205ENST00000407585 GOLGB1Q14789 3259 aaKnown RBP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 NSFP46459 744 aaKnown RBP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 PLA2G4FQ68DD2 849 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 LMBRD2Q68DH5 695 aaPredicted RBP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 MCOLN2Q8IZK6 566 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 NKX1-2Q9UD57 310 aaPredicted RBP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 MROH7Q68CQ1 1323 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 PI4K2BG5E9Z4 385 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 YWHABP31946 246 aaKnown RBP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 XKR9Q5GH70 373 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 POMGNT1Q8WZA1 660 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 DDX1Q92499 740 aaKnown RBP18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 ZNF622Q969S3 477 aaKnown RBP eCLIP18.3■□□□□ 0.524e-7■■■□□ 16.2
PACSIN2-205ENST00000407585 RIT2Q99578 217 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 C11orf70Q9BRQ4 267 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 TMEM8AQ9HCN3 771 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 LGALS13Q9UHV8 139 aa18.3■□□□□ 0.52
PACSIN2-205ENST00000407585 CCNB1P14635 433 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 CA4P22748 312 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 CNGA1P29973 690 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 ADSSP30520 456 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 QARSP47897 775 aaKnown RBP18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 POLGP54098 1239 aaPredicted RBP18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 TMEM63BQ5T3F8 832 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 SV2AQ7L0J3 742 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 LDHDQ86WU2 507 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 UTP4Q969X6 686 aaKnown RBP18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 DDX27Q96GQ7 796 aaKnown RBP18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 OSBPL8Q9BZF1 889 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 TRABDQ9H4I3 376 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 AHDC1Q5TGY3 1603 aaPredicted RBP18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 MAPK13O15264 365 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 GRIN3BO60391 1043 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 UPP2O95045 317 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 ZSCAN5DPP0CG00 497 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 ALDH3A1P30838 453 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 GTF2BQ00403 316 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 C12orf56Q8IXR9 622 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 BBOF1Q8ND07 529 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 LRRC8CQ8TDW0 803 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 ZNF148Q9UQR1 794 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 TCP10L2B9ZVM9 353 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 ATF7P17544 494 aaPredicted RBP18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 SPARCL1Q14515 664 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 IL31RAQ8NI17 732 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 CHURC1Q8WUH1 139 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 SMC6Q96SB8 1091 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 KIAA1683Q9H0B3 1180 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 EXOC7Q9UPT5 735 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 CHKBQ9Y259 395 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 USH1CQ9Y6N9 552 aa18.29■□□□□ 0.52
PACSIN2-205ENST00000407585 GREB1LQ9C091 1923 aaPredicted RBP18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 DENND3A2RUS2 1198 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 TCEA3O75764 348 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 CCNHP51946 323 aaPredicted RBP18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 RAD23BP54727 409 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 PKN2Q16513 984 aaKnown RBP18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 HHATQ5VTY9 493 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 PODNQ7Z5L7 613 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 CFAP57Q96MR6 1250 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 IWS1Q96ST2 819 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 HOMER2Q9NSB8 354 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 C1orf112Q9NSG2 853 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 WDR91A4D1P6 747 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 CBX6O95503 412 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 KRT10P13645 584 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 PCK1P35558 622 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 GPC3P51654 580 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 SOX10P56693 466 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 TAS2R40P59535 323 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 CENPCQ03188 943 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 PCNX4Q63HM2 1172 aa18.28■□□□□ 0.52
PACSIN2-205ENST00000407585 MIS18BP1Q6P0N0 1132 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms