RNA–Protein interactions for RNA: ENST00000406757.2

GPC3-203, Transcript of glypican 3, humanhuman

TSL 2

Gene GPC3, Length 836 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-203ENST00000406757 PARP2Q9UGN5 583 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 FRMD4BQ9Y2L6 1034 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 IPPQ9Y573 584 aa9.07□□□□□ -0.96
GPC3-203ENST00000406757 ZNF233A6NK53 670 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 LACTBL1A8MY62 500 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 PI4K2BG5E9Z4 385 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 PES1O00541 588 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 ENPP3O14638 875 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 GPR37L1O60883 481 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 FGFR1OPO95684 399 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 SERPINC1P01008 464 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 CXCL8P10145 99 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 PRKCSHP14314 528 aaPredicted RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 COPB1P53618 953 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 SNRPFP62306 86 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 CYP24A1Q07973 514 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 ENOX2Q16206 610 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 EPC2Q52LR7 807 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 TCERG1LQ5VWI1 586 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 PTCRAQ6ISU1 281 aaPredicted RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 GJD3Q8N144 294 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 SEPT8Q92599 483 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 ELMO3Q96BJ8 720 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 MRPL38Q96DV4 380 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 BORCS6Q96GS4 357 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 YME1L1Q96TA2 773 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 TUBGCP2Q9BSJ2 902 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.06□□□□□ -0.96
GPC3-203ENST00000406757 FAM105AQ9NUU6 356 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 RBAKQ9NYW8 714 aaPredicted RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 IFNKQ9P0W0 207 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 CGNQ9P2M7 1197 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 ARMCX3Q9UH62 379 aaPredicted RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 LIMA1Q9UHB6 759 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 CPSF3Q9UKF6 684 aaKnown RBP9.06□□□□□ -0.96
GPC3-203ENST00000406757 PCDHB2Q9Y5E7 798 aa9.06□□□□□ -0.96
GPC3-203ENST00000406757 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 LRRIQ3A6PVS8 624 aaPredicted RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 H3BQ06 376 aaPredicted RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 SLC16A3O15427 465 aaKnown RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 TEX33O43247 280 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 LDHAP00338 332 aaKnown RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 DLATP10515 647 aaKnown RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 ITGA4P13612 1032 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 KRT13P13646 458 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 GRM5P41594 1212 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 VAMP7P51809 220 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 AFF1P51825 1210 aaKnown RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 GUCY2FP51841 1108 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 GPM6BQ13491 265 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 MYBPC2Q14324 1141 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 PCBP1Q15365 356 aaKnown RBP eCLIP9.05□□□□□ -0.96
GPC3-203ENST00000406757 PTPROQ16827 1216 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 SLC10A6Q3KNW5 377 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 DCAF4L1Q3SXM0 396 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 GLRA4Q5JXX5 417 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 C1orf220Q5T0J3 134 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 FOXR2Q6PJQ5 311 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 EP400NLQ6ZTU2 488 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 APTXQ7Z2E3 356 aaKnown RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 FRMD5Q7Z6J6 570 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 FAM114A1Q8IWE2 563 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 TRIM59Q8IWR1 403 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 ZNF516Q92618 1163 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 TOP1MTQ969P6 601 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 MFSD14AQ96MC6 490 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 FBXL18Q96ME1 805 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 ACAP3Q96P50 834 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 RPF1Q9H9Y2 349 aaKnown RBP9.05□□□□□ -0.96
GPC3-203ENST00000406757 CHST12Q9NRB3 414 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 RGS18Q9NS28 235 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 MIOSQ9NXC5 875 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 UTP18Q9Y5J1 556 aaKnown RBP eCLIP9.05□□□□□ -0.96
GPC3-203ENST00000406757 SQORQ9Y6N5 450 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 PTPRJQ12913 1337 aa9.05□□□□□ -0.96
GPC3-203ENST00000406757 GRXCR2A6NFK2 248 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 C9IYK1 514 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 H3BNC9 293 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 LRRN2O75325 713 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 RECQL4O94761 1208 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 GNA14O95837 355 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 NFICP08651 508 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 CLTAP09496 248 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 FGFR1P11362 822 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 ATF7P17544 494 aaPredicted RBP9.04□□□□□ -0.96
GPC3-203ENST00000406757 EEF1GP26641 437 aaKnown RBP9.04□□□□□ -0.96
GPC3-203ENST00000406757 GCLMP48507 274 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 KLK7P49862 253 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 GATMP50440 423 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 UBASH3AP57075 661 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 PPP3CAQ08209 521 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 KCNH2Q12809 1159 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 BFSP1Q12934 665 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 UVSSAQ2YD98 709 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 VWA3BQ502W6 1294 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 TCEAL5Q5H9L2 206 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 MIIPQ5JXC2 388 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 AGMOQ6ZNB7 445 aa9.04□□□□□ -0.96
GPC3-203ENST00000406757 ECHDC2Q86YB7 292 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms