RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 ZFP14Q9HCL3 533 aa23.13■■□□□ 1.29
RHBDD3-202ENST00000406335 H3BQV1 296 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 MAN2B1O00754 1011 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 ZNF197O14709 1029 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 RPA1P27694 616 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 BRCC3P46736 316 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 RPS9P46781 194 aaKnown RBP23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 FXR2P51116 673 aaKnown RBP eCLIP23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 GRM2Q14416 872 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 ECM1Q16610 540 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 ELMOD1Q8N336 334 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 BSNDQ8WZ55 320 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 CLDN23Q96B33 292 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 ELSPBP1Q96BH3 223 aa23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.12■■□□□ 1.29
RHBDD3-202ENST00000406335 TMEM189-UBE2V1I3L0A0 370 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 CEBPBP17676 345 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 CYP11B2P19099 503 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 EFNA5P52803 228 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 NRLP54845 237 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 MTAPQ13126 283 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 UPP1Q16831 310 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 SLC5A9Q2M3M2 681 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 CYP4A22Q5TCH4 519 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 ATF7IP2Q5U623 682 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 PDZD4Q76G19 769 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 ZNF461Q8TAF7 563 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 KIFC3Q9BVG8 833 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 TRMT61BQ9BVS5 477 aaKnown RBP23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 FAM126AQ9BYI3 521 aaPredicted RBP23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 EPC1Q9H2F5 836 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 GOLGA2P5Q9HBQ8 144 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 POLD4Q9HCU8 107 aa23.11■■□□□ 1.29
RHBDD3-202ENST00000406335 IGFBP6P24592 240 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 CCT6AP40227 531 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 OSTNP61366 133 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 CUL4AQ13619 759 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 IL17AQ16552 155 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 LPAL2Q16609 132 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 LARP1BQ659C4 914 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 IQCEQ6IPM2 695 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 DNASE1L2Q92874 299 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 DDX27Q96GQ7 796 aaKnown RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 CCDC94Q9BW85 323 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 TOPORSQ9NS56 1045 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 LRWD1Q9UFC0 647 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 NUB1Q9Y5A7 615 aa23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 EP300Q09472 2414 aaPredicted RBP23.1■■□□□ 1.29
RHBDD3-202ENST00000406335 DCDC2BA2VCK2 349 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 H7C4K7 107 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 K7ERI5 159 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 LILRB5O75023 590 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 ROR1Q01973 937 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 PRR23BQ6ZRT6 265 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 IGSF22Q8N9C0 903 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 IRF7Q92985 503 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 PPP1R10Q96QC0 940 aaKnown RBP23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 CCDC113Q9H0I3 377 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 GTF3C3Q9Y5Q9 886 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 MYH15Q9Y2K3 1946 aa23.09■■□□□ 1.29
RHBDD3-202ENST00000406335 MTCL1Q9Y4B5 1905 aaKnown RBP23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 SMIM28A0A1B0GU29 152 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 PP2D1A8MPX8 630 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 PDIA5Q14554 519 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 RILPL1Q5EBL4 403 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 HAUS3Q68CZ6 603 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 FAM3CQ92520 227 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 ZNF512Q96ME7 567 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 RTKNQ9BST9 563 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 TCHPQ9BT92 498 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 LMAN1LQ9HAT1 526 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 AVENQ9NQS1 362 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 SLC38A7Q9NVC3 462 aa23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 DAXXQ9UER7 740 aaPredicted RBP23.08■■□□□ 1.29
RHBDD3-202ENST00000406335 DOCK8Q8NF50 2099 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 COL4A3Q01955 1670 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 CCDC169A6NNP5 214 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 PODXLO00592 558 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 CDC25AP30304 524 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 GDI1P31150 447 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 FAM78AQ5JUQ0 283 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 NT5DC1Q5TFE4 455 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 SNX29Q8TEQ0 813 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 KIFAP3Q92845 792 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 TCEAL4Q96EI5 215 aa23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 PRMT8Q9NR22 394 aaPredicted RBP23.07■■□□□ 1.28
RHBDD3-202ENST00000406335 ARHGEF37A1IGU5 675 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 WDR27A2RRH5 827 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 LAD1O00515 517 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 EDN1P05305 212 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 MYL4P12829 197 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 ATF2P15336 505 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 MUTP22033 750 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 PRPHP41219 470 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 ATP2C1P98194 919 aaPredicted RBP23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 SPEM2Q0P670 501 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 CTXN3Q4LDR2 81 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 SLC8B1Q6J4K2 584 aa23.06■■□□□ 1.28
RHBDD3-202ENST00000406335 C3orf58Q8NDZ4 430 aa23.06■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms