RNA–Protein interactions for RNA: ENST00000406109.5

RPA3-204, Transcript of replication protein A3, humanhuman

TSL 3 BASIC

Gene RPA3, Length 434 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-204ENST00000406109 NPAS3Q8IXF0 933 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 RNF149Q8NC42 400 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 CNNM3Q8NE01 707 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PSPC1Q8WXF1 523 aaKnown RBP6.85□□□□□ -1.31
RPA3-204ENST00000406109 MTMR9Q96QG7 549 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 COLEC11Q9BWP8 271 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 FAM126AQ9BYI3 521 aaPredicted RBP6.85□□□□□ -1.31
RPA3-204ENST00000406109 CSRNP2Q9H175 543 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 XPNPEP1Q9NQW7 623 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 HEBP1Q9NRV9 189 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 DNMT3BQ9UBC3 853 aaKnown RBP6.85□□□□□ -1.31
RPA3-204ENST00000406109 GIT1Q9Y2X7 761 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PCDHB6Q9Y5E3 794 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 ARID2Q68CP9 1835 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 PCNX2A6NKB5 2137 aa6.85□□□□□ -1.31
RPA3-204ENST00000406109 COL4A2P08572 1712 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 ASXL3Q9C0F0 2248 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 GREB1Q4ZG55 1949 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 A0A087WWV3 80 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 A0A1B0GUA9 196 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 TM4SF5O14894 197 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 B4GALT5O43286 388 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 STX6O43752 255 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 DKC1O60832 514 aaKnown RBP eCLIP6.84□□□□□ -1.31
RPA3-204ENST00000406109 ECI2O75521 394 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 SLITRK3O94933 977 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 KIF4AO95239 1232 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 P4HBP07237 508 aaKnown RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 C8AP07357 584 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 OR52Z1P0C646 297 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 ARF4P18085 180 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 FCARP24071 287 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 AXLP30530 894 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 QARSP47897 775 aaKnown RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 PFKPQ01813 784 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 MBTD1Q05BQ5 628 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 ADCY1Q08828 1119 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 ORC2Q13416 577 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 CTTNQ14247 550 aaKnown RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 GAS6Q14393 721 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 HSP90AA2PQ14568 343 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 EMC2Q15006 297 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 LPAL2Q16609 132 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 RILPL1Q5EBL4 403 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 AXDND1Q5T1B0 1012 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 FOXD4L5Q5VV16 416 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 TANGO2Q6ICL3 276 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 NOTUMQ6P988 496 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 ZNF852Q6ZMS4 543 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 C4orf32Q8N8J7 132 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 NETO1Q8TDF5 533 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 ASAP3Q8TDY4 903 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 HASPINQ8TF76 798 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 FOXD4L4Q8WXT5 416 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 SLC7A3Q8WY07 619 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 PIK3R5Q8WYR1 880 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 SECISBP2LQ93073 1101 aaKnown RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 CCDC51Q96ER9 411 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 DYDC2Q96IM9 177 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 CEP170P1Q96L14 293 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 NELL2Q99435 816 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 EIF2AK1Q9BQI3 630 aaKnown RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 JPH2Q9BR39 696 aaPredicted RBP6.84□□□□□ -1.31
RPA3-204ENST00000406109 TTPALQ9BTX7 342 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 APOL6Q9BWW8 343 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 CHRDQ9H2X0 955 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 PLA2G2EQ9NZK7 142 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 RGL1Q9NZL6 768 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 KLK14Q9P0G3 267 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 KCNH3Q9ULD8 1083 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 MAST4O15021 2626 aa6.84□□□□□ -1.31
RPA3-204ENST00000406109 CFAP46Q8IYW2 2715 aa6.84□□□□□ -1.32
RPA3-204ENST00000406109 TICRRQ7Z2Z1 1910 aa6.84□□□□□ -1.32
RPA3-204ENST00000406109 ATMQ13315 3056 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 ASCC3Q8N3C0 2202 aaKnown RBP6.83□□□□□ -1.32
RPA3-204ENST00000406109 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.83□□□□□ -1.32
RPA3-204ENST00000406109 PTGESO14684 152 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 ASAP2O43150 1006 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 HRO43593 1189 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 LRP3O75074 770 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 NR1I2O75469 434 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 TADA2AO75478 443 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 RETP07949 1114 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 PMLP29590 882 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 HOXC13P31276 330 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 YWHABP31946 246 aaKnown RBP6.83□□□□□ -1.32
RPA3-204ENST00000406109 RFC5P40937 340 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 CYP4A11Q02928 519 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 CREMQ03060 361 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 POU5F1BQ06416 359 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 SPIRE1Q08AE8 756 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 DMWDQ09019 674 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 GRIK3Q13003 919 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 RAB33AQ14088 237 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 BECN1Q14457 450 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 PCBP1Q15365 356 aaKnown RBP eCLIP6.83□□□□□ -1.32
RPA3-204ENST00000406109 PSMD5Q16401 504 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 UVSSAQ2YD98 709 aa6.83□□□□□ -1.32
RPA3-204ENST00000406109 PABPC1LQ4VXU2 614 aaKnown RBP6.83□□□□□ -1.32
RPA3-204ENST00000406109 WDR44Q5JSH3 913 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms