RNA–Protein interactions for RNA: ENST00000404040.5

HDAC11-204, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-204ENST00000404040 XRCC6P12956 609 aaKnown RBP eCLIP19.68■□□□□ 0.74
HDAC11-204ENST00000404040 FGFR3P22607 806 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 KRT85P78386 507 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 SLC39A14Q15043 492 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 RSPO4Q2I0M5 234 aaPredicted RBP19.68■□□□□ 0.74
HDAC11-204ENST00000404040 PABPC1LQ4VXU2 614 aaKnown RBP19.68■□□□□ 0.74
HDAC11-204ENST00000404040 MAEAQ7L5Y9 396 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 AK8Q96MA6 479 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 C2orf40Q9H1Z8 148 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 NCDNQ9UBB6 729 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 DNMT3BQ9UBC3 853 aaKnown RBP19.68■□□□□ 0.74
HDAC11-204ENST00000404040 MTRRQ9UBK8 725 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
HDAC11-204ENST00000404040 MYH11P35749 1972 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 TMEM189-UBE2V1I3L0A0 370 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 CD72P21854 359 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 OR1D2P34982 312 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 CSTF1Q05048 431 aaKnown RBP19.67■□□□□ 0.74
HDAC11-204ENST00000404040 PRPF4BQ13523 1007 aaKnown RBP19.67■□□□□ 0.74
HDAC11-204ENST00000404040 PTPAQ15257 358 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 UVSSAQ2YD98 709 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 VARS2Q5ST30 1063 aaKnown RBP19.67■□□□□ 0.74
HDAC11-204ENST00000404040 IGSF22Q8N9C0 903 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 ING5Q8WYH8 240 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 BSNDQ8WZ55 320 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 CCDC113Q9H0I3 377 aa19.67■□□□□ 0.74
HDAC11-204ENST00000404040 SLC26A4O43511 780 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 PPP6R2O75170 966 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 ECI2O75521 394 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 PRKCBP05771 671 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 SPATA31C1P0DKV0 1188 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 MUTP22033 750 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 TARSP26639 723 aaKnown RBP19.66■□□□□ 0.74
HDAC11-204ENST00000404040 LONP1P36776 959 aaKnown RBP19.66■□□□□ 0.74
HDAC11-204ENST00000404040 CEBPZQ03701 1054 aaKnown RBP19.66■□□□□ 0.74
HDAC11-204ENST00000404040 MAPK6Q16659 721 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 TMEM132AQ24JP5 1023 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 ZBTB41Q5SVQ8 909 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 TPRG1Q6ZUI0 275 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 RTL10Q7L3V2 364 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 ZBTB44Q8NCP5 570 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 LINC00301Q8NCQ3 95 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 ATRIPQ8WXE1 791 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 NELL1Q92832 810 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 CLDN23Q96B33 292 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 ADPGKQ9BRR6 497 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 TUFT1Q9NNX1 390 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 SMG5Q9UPR3 1016 aaKnown RBP19.66■□□□□ 0.74
HDAC11-204ENST00000404040 CDY1Q9Y6F8 540 aa19.66■□□□□ 0.74
HDAC11-204ENST00000404040 VWA3AA6NCI4 1184 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 SPTLC2O15270 562 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 EDN1P05305 212 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 DNM1Q05193 864 aaKnown RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 SLC5A9Q2M3M2 681 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 KRT79Q5XKE5 535 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 EEF1DP3Q658K8 133 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 KCTD17Q8N5Z5 321 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 KRI1Q8N9T8 703 aaKnown RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 POLR3CQ9BUI4 534 aaPredicted RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 SCAND2PQ9GZW5 306 aaPredicted RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 EPC1Q9H2F5 836 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 PRMT8Q9NR22 394 aaPredicted RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 ZSCAN32Q9NX65 697 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 GDE1Q9NZC3 331 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 TFIP11Q9UBB9 837 aaKnown RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 USP20Q9Y2K6 914 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 MRPS23Q9Y3D9 190 aaKnown RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 SRPRBQ9Y5M8 271 aaKnown RBP19.65■□□□□ 0.74
HDAC11-204ENST00000404040 BACE2Q9Y5Z0 518 aa19.65■□□□□ 0.74
HDAC11-204ENST00000404040 ACKR2O00590 384 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 LILRB5O75023 590 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 B3GAT3O94766 335 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 RHOP08100 348 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 IGFBP6P24592 240 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 NAMPTP43490 491 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 RPS9P46781 194 aaKnown RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 DCAF4L1Q3SXM0 396 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 FOXD4L6Q3SYB3 417 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 GLRA4Q5JXX5 417 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 FOXD4L3Q6VB84 417 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 CATSPER3Q86XQ3 398 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 GPR161Q8N6U8 529 aaKnown RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 DDX27Q96GQ7 796 aaKnown RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 PPP1R10Q96QC0 940 aaKnown RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 NELL2Q99435 816 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 AVENQ9NQS1 362 aaPredicted RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 GDAQ9Y2T3 454 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 SPAG17Q6Q759 2223 aa19.64■□□□□ 0.73
HDAC11-204ENST00000404040 CNOT1A5YKK6 2376 aaKnown RBP19.64■□□□□ 0.73
HDAC11-204ENST00000404040 MED24O75448 989 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 RPA1P27694 616 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 TKTP29401 623 aaKnown RBP19.63■□□□□ 0.73
HDAC11-204ENST00000404040 CLCNKBP51801 687 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 CD300LGQ6UXG3 332 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 ANKS3Q6ZW76 656 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 DEPTORQ8TB45 409 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 DNASE1L2Q92874 299 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 PLA2G2FQ9BZM2 168 aa19.63■□□□□ 0.73
HDAC11-204ENST00000404040 SHISA7A6NL88 538 aa19.62■□□□□ 0.73
HDAC11-204ENST00000404040 NCAM2O15394 837 aa19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms