RNA–Protein interactions for RNA: ENST00000401921.5

HDAC9-201, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-201ENST00000401921 THOC1Q96FV9 657 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CHMP6Q96FZ7 201 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CNOT10Q9H9A5 744 aaKnown RBP8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CYP26B1Q9NR63 512 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 CHST7Q9NS84 486 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 HOMER3Q9NSC5 361 aa8.2□□□□□ -1.1
HDAC9-201ENST00000401921 TTC36A6NLP5 189 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 NOP56O00567 594 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF862O60290 1169 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 TBC1D12O60347 775 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 RALAP11233 206 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 CHRNB2P17787 502 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 PAX7P23759 505 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 STX2P32856 288 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 MTM1Q13496 603 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 MAP4K3Q8IVH8 894 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 MAIP1Q8WWC4 291 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 ARHGEF2Q92974 986 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 ACSF2Q96CM8 615 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 PWWP2AQ96N64 755 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 XPO6Q96QU8 1125 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 VPS37BQ9H9H4 285 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF302Q9NR11 478 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 PCDHB2Q9Y5E7 798 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 KLHL33A6NCF5 533 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 MAPTP10636 758 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 GBP1P32455 592 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 BACE1P56817 501 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 NLRP11P59045 1033 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 EMC2Q15006 297 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 QPCTQ16769 361 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 ANGEL2Q5VTE6 544 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 NUGGCQ68CJ6 796 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 PRUNE1Q86TP1 453 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 CCDC13Q8IYE1 715 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 GRK7Q8WTQ7 553 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 CDHR1Q96JP9 859 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 DDX23Q9BUQ8 820 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 TIPINQ9BVW5 301 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 TRIM6Q9C030 488 aaPredicted RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 IRAK4Q9NWZ3 460 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 NKIRAS1Q9NYS0 192 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 CPSF2Q9P2I0 782 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 FBXO40Q9UH90 709 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 DDX20Q9UHI6 824 aaKnown RBP8.19□□□□□ -1.1
HDAC9-201ENST00000401921 TELO2Q9Y4R8 837 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 ARFGEF1Q9Y6D6 1849 aa8.19□□□□□ -1.1
HDAC9-201ENST00000401921 LRRD1A4D1F6 860 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 INO80B-WBP1J3KQ70 363 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GGPS1O95749 300 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 KRT15P19012 456 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 ITGA8P53708 1063 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 IGBP1P78318 339 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 STXBP2Q15833 593 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 XKR3Q5GH77 459 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GADL1Q6ZQY3 521 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 NIPA1Q7RTP0 329 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 VSIG10LQ86VR7 867 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 SRRM1Q8IYB3 904 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF513Q8N8E2 541 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 EIF1ADQ8N9N8 165 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 MORC4Q8TE76 937 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GMLQ99445 158 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 INO80BQ9C086 356 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 ACAD9Q9H845 621 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 LRRC4CQ9HCJ2 640 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 MRPL47Q9HD33 250 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 BAIAP2L1Q9UHR4 511 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 PCDHA3Q9Y5H8 950 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 H0YCG3 227 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GOLGA8MH3BSY2 632 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 PLA2G6O60733 806 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 KRT1P04264 644 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 TMEM191BP0C7N4 346 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 KRT10P13645 584 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 NCKAP1LP55160 1127 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 C1orf220Q5T0J3 134 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 FKBP1CQ5VVH2 108 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 CROCCP2Q86T23 111 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 HELQQ8TDG4 1101 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 TACO1Q9BSH4 297 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 TEX13BQ9BXU2 312 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 CDC42EP4Q9H3Q1 356 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 NOCTQ9UK39 431 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GINS2Q9Y248 185 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 ZNF831Q5JPB2 1677 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 FOXO6A8MYZ6 492 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 H0YGN5 161 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 PPFIA2O75334 1257 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 CLTAP09496 248 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 ATP5DP30049 168 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 BAG6P46379 1132 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 GPC3P51654 580 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 CNTN2Q02246 1040 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 TMED2Q15363 201 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 CLEC16AQ2KHT3 1053 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 MCOLN2Q8IZK6 566 aa8.18□□□□□ -1.1
HDAC9-201ENST00000401921 RBBP8NLQ8NC74 664 aaPredicted RBP8.18□□□□□ -1.1
HDAC9-201ENST00000401921 TMC2Q8TDI7 906 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms