RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 NAP1L3Q99457 506 aaPredicted RBP17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CRISPLD2Q9H0B8 497 aa17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CYP26B1Q9NR63 512 aa17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 FAM114A2Q9NRY5 505 aa17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 SEPT9Q9UHD8 586 aaPredicted RBP17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 PPME1Q9Y570 386 aa17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 LOXHD1Q8IVV2 1947 aa17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 BRCA2P51587 3418 aa17.1■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MOXD2PA6NHM9 499 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 EXOC3O60645 756 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 SGPL1O95470 568 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MYCNP04198 464 aaPredicted RBP17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MYZAPP0CAP1 466 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 TRIM49P0CI25 452 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 TRIM49CP0CI26 452 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MAPTP10636 758 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 KRT13P13646 458 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MFSD10Q14728 455 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 PTPROQ16827 1216 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 PLA2G4FQ68DD2 849 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ARFGAP2Q8N6H7 521 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 TMEM174Q8WUU8 243 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CEP170P1Q96L14 293 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CEP89Q96ST8 783 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 TRPC6Q9Y210 931 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ATXN2Q99700 1313 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ANKRD62A6NC57 917 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ZBTB42B2RXF5 422 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 H0YGN5 161 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 NDUFAB1O14561 156 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 HIP1RO75146 1068 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CABYRO75952 493 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ITGA4P13612 1032 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 LSP1P33241 339 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 PSEN2P49810 448 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ACLYP53396 1101 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 MAPK7Q13164 816 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 BIRC3Q13489 604 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 TTC19Q6DKK2 380 aaPredicted RBP17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 RUFY4Q6ZNE9 571 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 SH2D3AQ9BRG2 576 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 EPN3Q9H201 632 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CARD9Q9H257 536 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 UTP11Q9Y3A2 253 aaKnown RBP17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 NFS1Q9Y697 457 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 FAM169AQ9Y6X4 670 aa17.09■□□□□ 0.33
CHRFAM7A-203ENST00000401522 DNM1LO00429 736 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 P4HA2O15460 535 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 DDX3YO15523 660 aaKnown RBP17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 CPP00450 1065 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 INSRRP14616 1297 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 ZNF484Q5JVG2 852 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 PADI6Q6TGC4 694 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 INTS8Q75QN2 995 aaKnown RBP17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 TMEM206Q9H813 350 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 OSGEPQ9NPF4 335 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 AMACRQ9UHK6 382 aa17.08■□□□□ 0.33
CHRFAM7A-203ENST00000401522 GOLGA6L10A0A0M3HER8 536 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 FGGP02679 453 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 MDH1P40925 334 aaKnown RBP17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 HADHBP55084 474 aaKnown RBP17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 CETN1Q12798 172 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 TCEAL1Q15170 157 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 UAP1Q16222 522 aaPredicted RBP17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 SKIDA1Q1XH10 827 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 MTERF2Q49AM1 385 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 TADA2BQ86TJ2 420 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 DDX42Q86XP3 938 aaKnown RBP eCLIP17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 RHOT2Q8IXI1 618 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 AGPAT1Q99943 283 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 RAB17Q9H0T7 212 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 PDLIM7Q9NR12 457 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 PHF24Q9UPV7 400 aa17.08■□□□□ 0.32
CHRFAM7A-203ENST00000401522 COL1A2P08123 1366 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 K7ENM7 598 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 TTI1O43156 1089 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 DAPK3O43293 454 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 DGAT1O75907 488 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 ABCB4P21439 1286 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 CTNNA1P35221 906 aaKnown RBP17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 GJA8P48165 433 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 PTENP60484 403 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 POU5F1Q01860 360 aaKnown RBP17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 TTC31Q49AM3 519 aaPredicted RBP17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 SPDYCQ5MJ68 293 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 AGBL2Q5U5Z8 902 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 C12orf56Q8IXR9 622 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 DAW1Q8N136 415 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 LMO3Q8TAP4 145 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 NEUROG2Q9H2A3 272 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 DHX33Q9H6R0 707 aaKnown RBP17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 LARSQ9P2J5 1176 aaKnown RBP17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 NRCAMQ92823 1304 aa17.07■□□□□ 0.32
CHRFAM7A-203ENST00000401522 SCN10AQ9Y5Y9 1956 aa17.06■□□□□ 0.32
CHRFAM7A-203ENST00000401522 KBTBD13C9JR72 458 aa17.06■□□□□ 0.32
CHRFAM7A-203ENST00000401522 SMIM10L2AP0DMW4 78 aa17.06■□□□□ 0.32
CHRFAM7A-203ENST00000401522 SMIM10L2BP0DMW5 78 aa17.06■□□□□ 0.32
CHRFAM7A-203ENST00000401522 RFC5P40937 340 aa17.06■□□□□ 0.32
CHRFAM7A-203ENST00000401522 ZNF844Q08AG5 666 aa17.06■□□□□ 0.32
CHRFAM7A-203ENST00000401522 PTGISQ16647 500 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms