RNA–Protein interactions for RNA: ENST00000400018.7

SKA3-203, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SKA3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-203ENST00000400018 EHBP1Q8NDI1 1231 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 OR8K1Q8NGG5 319 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 HAUS4Q9H6D7 363 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 HMGXB4Q9UGU5 601 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 ADAMTS1Q9UHI8 967 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 REXO2Q9Y3B8 237 aaKnown RBP12.61□□□□□ -0.39
SKA3-203ENST00000400018 H0YCG3 227 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 TMEM191BP0C7N4 346 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 FGFR1P11362 822 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 POLR2BP30876 1174 aaKnown RBP12.61□□□□□ -0.39
SKA3-203ENST00000400018 LRRC26Q2I0M4 334 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 TAF2Q6P1X5 1199 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 SRGAP1Q7Z6B7 1085 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 SLC47A2Q86VL8 602 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 FAM126BQ8IXS8 530 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 SLC17A8Q8NDX2 589 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 ZNF592Q92610 1267 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 ACAP3Q96P50 834 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 NHEJ1Q9H9Q4 299 aaPredicted RBP12.61□□□□□ -0.39
SKA3-203ENST00000400018 ITIH6Q6UXX5 1313 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 PDE4DIPQ5VU43 2346 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 B4GALT3O60512 393 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 UPP2O95045 317 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 KRT5P13647 590 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 PTK2Q05397 1052 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 NCOA4Q13772 614 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 ZACNQ401N2 412 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 HGSNATQ68CP4 663 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 NOTUMQ6P988 496 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 SLC27A1Q6PCB7 646 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 PASD1Q8IV76 773 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 EXOC8Q8IYI6 725 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 FBXL13Q8NEE6 735 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 DBF4BQ8NFT6 615 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 ADPGKQ9BRR6 497 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 TMEM8AQ9HCN3 771 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 TAS2R14Q9NYV8 317 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 PCDHB2Q9Y5E7 798 aa12.61□□□□□ -0.39
SKA3-203ENST00000400018 MOXD2PA6NHM9 499 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 RABGGTBP53611 331 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 GSDMDP57764 484 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 FBXO46Q6PJ61 603 aaPredicted RBP12.6□□□□□ -0.39
SKA3-203ENST00000400018 ZNF571Q7Z3V5 609 aaPredicted RBP12.6□□□□□ -0.39
SKA3-203ENST00000400018 CCDC150Q8NCX0 1101 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 HELQQ8TDG4 1101 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 LINC01599Q8WXQ3 324 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 MCOLN1Q9GZU1 580 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 APEX2Q9UBZ4 518 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 OGDHLQ9ULD0 1010 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 AGAP1Q9UPQ3 857 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 TIMM13Q9Y5L4 95 aaPredicted RBP12.6□□□□□ -0.39
SKA3-203ENST00000400018 CITO14578 2027 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 ANK1P16157 1881 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 MYO7AQ13402 2215 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 CASTOR2A6NHX0 329 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 DNM1LO00429 736 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 FANCGO15287 622 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 EVI5O60447 810 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 KPNA6O60684 536 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 ACRP10323 421 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 SCNN1GP51170 649 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 ZBED6P86452 979 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 FAAP100Q0VG06 881 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 PAK2Q13177 524 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 WDR72Q3MJ13 1102 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 CGRRF1Q99675 332 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 IFIH1Q9BYX4 1025 aaKnown RBP12.6□□□□□ -0.39
SKA3-203ENST00000400018 GOLPH3Q9H4A6 298 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 PHF24Q9UPV7 400 aa12.6□□□□□ -0.39
SKA3-203ENST00000400018 A0A087X0T9 212 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 F8VZ95 297 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 TPM1P09493 284 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 FAM228BP0C875 321 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 SYN1P17600 705 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 SLC39A5Q6ZMH5 540 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 IFNLR1Q8IU57 520 aaPredicted RBP12.59□□□□□ -0.39
SKA3-203ENST00000400018 CNGA4Q8IV77 575 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 DNAJC7Q99615 494 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 NFKBIZQ9BYH8 718 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 LACRTQ9GZZ8 138 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 WNT8AQ9H1J5 351 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 SMYD3Q9H7B4 428 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 PPME1Q9Y570 386 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 PAXBP1Q9Y5B6 917 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 MROH7Q68CQ1 1323 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 PIK3R2O00459 728 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 ATF7P17544 494 aaPredicted RBP12.59□□□□□ -0.39
SKA3-203ENST00000400018 NOP14P78316 857 aaKnown RBP12.59□□□□□ -0.39
SKA3-203ENST00000400018 FAM187BQ17R55 369 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 SFMBT2Q5VUG0 894 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 AGMOQ6ZNB7 445 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 C15orf39Q6ZRI6 1047 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 IRF2BP2Q7Z5L9 587 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 GLYCTKQ8IVS8 523 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 NAA15Q9BXJ9 866 aaKnown RBP12.59□□□□□ -0.39
SKA3-203ENST00000400018 SDCBP2Q9H190 292 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 FAM105AQ9NUU6 356 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 CEP72Q9P209 647 aa12.59□□□□□ -0.39
SKA3-203ENST00000400018 PUF60Q9UHX1 559 aaKnown RBP12.59□□□□□ -0.39
SKA3-203ENST00000400018 TNRC18O15417 2968 aaPredicted RBP12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms