RNA–Protein interactions for RNA: ENST00000399629.5

CACNA1C-213, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 6,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-213ENST00000399629 CACNA2D2Q9NY47 1150 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 MIF4GDA9UHW6 222 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 SUPT3HO75486 399 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 ASS1P00966 412 aaKnown RBP12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 ZRANB3Q5FWF4 1079 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 CHMP1BQ7LBR1 199 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 PPM1NQ8N819 430 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 RABGGTAQ92696 567 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 ELMO2Q96JJ3 720 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 NDEL1Q9GZM8 345 aa12.71□□□□□ -0.37
CACNA1C-213ENST00000399629 MED21Q13503 144 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 C12orf60Q5U649 245 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 B4GALNT2Q8NHY0 566 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 MRFAP1L1Q96HT8 127 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 PPP1R2P1Q96PQ5 205 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 PRR12Q9ULL5 1215 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 CAPN7Q9Y6W3 813 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 ABCC3O15438 1527 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 NPHP3-ACAD11A0A0J9YXS1 232 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 SPTLC1O15269 473 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 LRRC74AQ0VAA2 488 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 GPS1Q13098 491 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 FLOT2Q14254 428 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 RESP18Q5W5W9 173 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF746Q6NUN9 644 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 ZC3H18Q86VM9 953 aaKnown RBP12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 RHOT1Q8IXI2 618 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF507Q8TCN5 953 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 RIN2Q8WYP3 895 aaPredicted RBP12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 MROH8Q9H579 483 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 MTMR4Q9NYA4 1195 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 TMEM63CQ9P1W3 806 aa12.71□□□□□ -0.38
CACNA1C-213ENST00000399629 PVALEFA0A1B0GWK0 134 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 ORC4O43929 436 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 IGSF3O75054 1194 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 ESRRAP11474 423 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 AVPR1AP37288 418 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 TAF6P49848 677 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 TP53BP2Q13625 1128 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 HIST2H2ACQ16777 129 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 HIST2H2AA3Q6FI13 130 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 C18orf8Q96DM3 657 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 ATG4CQ96DT6 458 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 AHCYL2Q96HN2 611 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 AGAP3Q96P47 875 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 CD274Q9NZQ7 290 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 NYAP2Q9P242 653 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 KCNN4O15554 427 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 FTLP02792 175 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 RPLP2P05387 115 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 FAM200BP0CF97 657 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 HERC6Q8IVU3 1022 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 RUBCNLQ9H714 662 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 HMX1Q9NP08 348 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 HSPBP1Q9NZL4 362 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 CTIFO43310 598 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 PALMO75781 387 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 CKMP06732 381 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 C6orf118Q5T5N4 469 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 RNF208Q9H0X6 261 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 FAM50BQ9Y247 325 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 SYCE1LA8MT33 242 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 EEF1DP29692 281 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 NCOA4Q13772 614 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 KRT31Q15323 416 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 RFWD2Q8NHY2 731 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 VMP1Q96GC9 406 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 NT5C1AQ9BXI3 368 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 FAM96AQ9H5X1 160 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 MRPL40Q9NQ50 206 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 EIF4E1BA6NMX2 242 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 PDHXO00330 501 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 MEFVO15553 781 aaPredicted RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 EIF3EP60228 445 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 CAV1Q03135 178 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 ADCY2Q08462 1091 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 PDIA6Q15084 440 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 CTXN3Q4LDR2 81 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 EPHA10Q5JZY3 1008 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 STAG2Q8N3U4 1231 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 NSUN4Q96CB9 384 aaKnown RBP12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 ZSCAN32Q9NX65 697 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 CDC23Q9UJX2 597 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 PPP2R3BQ9Y5P8 575 aa12.7□□□□□ -0.38
CACNA1C-213ENST00000399629 DARSP14868 501 aaKnown RBP12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 PDXDC1Q6P996 788 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 HTATIP2Q9BUP3 242 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 FAM49BQ9NUQ9 324 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 ARHGEF38Q9NXL2 777 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 PREX2Q70Z35 1606 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 F5H5T6 163 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 NDUFS2O75306 463 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 NDUFA10O95299 355 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 PBLDP30039 288 aaPredicted RBP12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 SOAT1P35610 550 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 RAP1GDS1P52306 607 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 ZNF543Q08ER8 600 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 PLA2G4FQ68DD2 849 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 FBXO32Q969P5 355 aa12.69□□□□□ -0.38
CACNA1C-213ENST00000399629 TSPAN17Q96FV3 270 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms