RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 LSP1P33241 339 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 MDH1P40925 334 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 RPL21P46778 160 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 PMS2P54278 862 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 NOP14P78316 857 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 TMEM270Q6UE05 265 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 METTL7BQ6UX53 244 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 GADL1Q6ZQY3 521 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 SEPT1Q8WYJ6 367 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 CYFIP2Q96F07 1278 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 RABEP2Q9H5N1 569 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 AZI2Q9H6S1 392 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 BCCIPQ9P287 314 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRAME-202ENST00000398743 MTRF1LQ9UGC7 380 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.78□□□□□ -0.04
PRAME-202ENST00000398743 MYH9P35579 1960 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 PASKQ96RG2 1323 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 CLDN3O15551 220 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 POTEJP0CG39 1038 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 HARSP12081 509 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 IRX3P78415 501 aaPredicted RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 KRT71Q3SY84 523 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 ZPBP2Q6X784 338 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 MON1BQ7L1V2 547 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 FAM167AQ96KS9 214 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 IMPG2Q9BZV3 1241 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 PABPC3Q9H361 631 aaKnown RBP14.78□□□□□ -0.04
PRAME-202ENST00000398743 LRRC19Q9H756 370 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 PTPN22Q9Y2R2 807 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 PPME1Q9Y570 386 aa14.78□□□□□ -0.04
PRAME-202ENST00000398743 EBAG9O00559 213 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 NDUFAB1O14561 156 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 FSCN2O14926 492 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 ECEL1O95672 775 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 NUDT17P0C025 328 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 EFNA5P52803 228 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 DRP2Q13474 957 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 NCOA4Q13772 614 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 ODF2Q5BJF6 829 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 LIN9Q5TKA1 542 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 DLK2Q6UY11 383 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 EEPD1Q7L9B9 569 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 ABRAQ8N0Z2 381 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 OR5B17Q8NGF7 314 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 MPHOSPH6Q99547 160 aaKnown RBP14.77□□□□□ -0.04
PRAME-202ENST00000398743 PAGR1Q9BTK6 254 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 TRIM7Q9C029 511 aa14.77□□□□□ -0.04
PRAME-202ENST00000398743 ZNFX1Q9P2E3 1918 aaKnown RBP14.77□□□□□ -0.05
PRAME-202ENST00000398743 AP3M2P53677 418 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 NOMO3P69849 1222 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 LY6KQ17RY6 165 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 SEZ6Q53EL9 994 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 C2CD6Q53TS8 623 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 SGO2Q562F6 1265 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 DENND2CQ68D51 928 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 PPP1R2P3Q6NXS1 205 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 PHLDB2Q86SQ0 1253 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 HOOK3Q86VS8 718 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 PASD1Q8IV76 773 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 BRSK2Q8IWQ3 736 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 RBBP8NLQ8NC74 664 aaPredicted RBP14.77□□□□□ -0.05
PRAME-202ENST00000398743 MAIP1Q8WWC4 291 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 PRPF31Q8WWY3 499 aaKnown RBP14.77□□□□□ -0.05
PRAME-202ENST00000398743 VCPIP1Q96JH7 1222 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 MRPL4Q9BYD3 311 aaKnown RBP14.77□□□□□ -0.05
PRAME-202ENST00000398743 EPN3Q9H201 632 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 MRPL47Q9HD33 250 aaKnown RBP14.77□□□□□ -0.05
PRAME-202ENST00000398743 ADAM22Q9P0K1 906 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 CNTN6Q9UQ52 1028 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 NUB1Q9Y5A7 615 aa14.77□□□□□ -0.05
PRAME-202ENST00000398743 A0A0G2JLL6 359 aaPredicted RBP14.76□□□□□ -0.05
PRAME-202ENST00000398743 TOM1L1O75674 476 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 KCNJ1P48048 391 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 PPP1R7Q15435 360 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 IER5Q5VY09 327 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 PRRT2Q7Z6L0 340 aaPredicted RBP14.76□□□□□ -0.05
PRAME-202ENST00000398743 SULF1Q8IWU6 871 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 BBXQ8WY36 941 aaPredicted RBP14.76□□□□□ -0.05
PRAME-202ENST00000398743 SLCO2A1Q92959 643 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 DCPSQ96C86 337 aaKnown RBP14.76□□□□□ -0.05
PRAME-202ENST00000398743 C11orf70Q9BRQ4 267 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 FAM129AQ9BZQ8 928 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 EPB41L4BQ9H329 900 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 NOVA2Q9UNW9 492 aaKnown RBP14.76□□□□□ -0.05
PRAME-202ENST00000398743 UMODL1Q5DID0 1318 aa14.76□□□□□ -0.05
PRAME-202ENST00000398743 ADM5C9JUS6 153 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 IRF6O14896 467 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 GAS2O43903 313 aaKnown RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 MSCO60682 206 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 PROSCO94903 275 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 CFHP08603 1231 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 PPP2R2AP63151 447 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 GRM1Q13255 1194 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 PTGISQ16647 500 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 LLGL2Q6P1M3 1020 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 WDR49Q8IV35 697 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.75□□□□□ -0.05
PRAME-202ENST00000398743 TCP11Q8WWU5 503 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 TCHPQ9BT92 498 aa14.75□□□□□ -0.05
PRAME-202ENST00000398743 ADARB2Q9NS39 739 aaKnown RBP14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms