RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 SMG7Q92540 1137 aaKnown RBP14.65□□□□□ -0.06
VCX3A-202ENST00000398729 STAMQ92783 540 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 NKD2Q969F2 451 aaPredicted RBP14.65□□□□□ -0.06
VCX3A-202ENST00000398729 EPSTI1Q96J88 318 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 ZMAT2Q96NC0 199 aaKnown RBP14.65□□□□□ -0.06
VCX3A-202ENST00000398729 CLSTN3Q9BQT9 956 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 ZHX3Q9H4I2 956 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 PIDD1Q9HB75 910 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 ZDHHC7Q9NXF8 308 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 CNTN3Q9P232 1028 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 STK17AQ9UEE5 414 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 MTMR6Q9Y217 621 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 EPG5Q9HCE0 2579 aa14.65□□□□□ -0.06
VCX3A-202ENST00000398729 FGFR3P22607 806 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 ABCD1P33897 745 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 ID4P47928 161 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 SOX4Q06945 474 aaPredicted RBP14.64□□□□□ -0.07
VCX3A-202ENST00000398729 USP49Q70CQ1 688 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 ERMP1Q7Z2K6 904 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 KRI1Q8N9T8 703 aaKnown RBP14.64□□□□□ -0.07
VCX3A-202ENST00000398729 SNX21Q969T3 373 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 WDR6Q9NNW5 1121 aaKnown RBP14.64□□□□□ -0.07
VCX3A-202ENST00000398729 TBX20Q9UMR3 447 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 VWA8A3KMH1 1905 aa14.64□□□□□ -0.07
VCX3A-202ENST00000398729 TPRP12270 2363 aaKnown RBP14.63□□□□□ -0.07
VCX3A-202ENST00000398729 OTOGLQ3ZCN5 2332 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 PODXLO00592 558 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 HNRNPDLO14979 420 aaKnown RBP14.63□□□□□ -0.07
VCX3A-202ENST00000398729 ZMYND10O75800 440 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 PAPLNO95428 1278 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 CLTAP09496 248 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 RPL9P32969 192 aaKnown RBP14.63□□□□□ -0.07
VCX3A-202ENST00000398729 KYAT1Q16773 422 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 SLC10A6Q3KNW5 377 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 SEZ6Q53EL9 994 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 LIN9Q5TKA1 542 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 RRAGBQ5VZM2 374 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 CD300LGQ6UXG3 332 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 C3orf58Q8NDZ4 430 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 FLCNQ8NFG4 579 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 ZNF707Q96C28 371 aaPredicted RBP14.63□□□□□ -0.07
VCX3A-202ENST00000398729 USP28Q96RU2 1077 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 PRKD2Q9BZL6 878 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 MFSD1Q9H3U5 465 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 PLEKHA5Q9HAU0 1116 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 MTRRQ9UBK8 725 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 FBXW11Q9UKB1 542 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 MORC2Q9Y6X9 1032 aaPredicted RBP14.63□□□□□ -0.07
VCX3A-202ENST00000398729 GPR179Q6PRD1 2367 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 CLUHO75153 1309 aa14.63□□□□□ -0.07
VCX3A-202ENST00000398729 PIGRP01833 764 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 CXCL8P10145 99 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 AOC1P19801 751 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 IGFBP6P24592 240 aaPredicted RBP14.62□□□□□ -0.07
VCX3A-202ENST00000398729 TKTP29401 623 aaKnown RBP14.62□□□□□ -0.07
VCX3A-202ENST00000398729 BRCC3P46736 316 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 RAB33AQ14088 237 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 PDCD11Q14690 1871 aaKnown RBP14.62□□□□□ -0.07
VCX3A-202ENST00000398729 SLC39A14Q15043 492 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 ANKS3Q6ZW76 656 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 HSCBQ8IWL3 235 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 C18orf25Q96B23 403 aaPredicted RBP14.62□□□□□ -0.07
VCX3A-202ENST00000398729 CLIC6Q96NY7 704 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 HAPLN2Q9GZV7 340 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 NUB1Q9Y5A7 615 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 BACE2Q9Y5Z0 518 aa14.62□□□□□ -0.07
VCX3A-202ENST00000398729 I3L4J1 428 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 OGTO15294 1046 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 MEFVO15553 781 aaPredicted RBP14.61□□□□□ -0.07
VCX3A-202ENST00000398729 ADAM12O43184 909 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 HSP90AA1P07900 732 aaKnown RBP14.61□□□□□ -0.07
VCX3A-202ENST00000398729 HNRNPA1P09651 372 aaKnown RBP eCLIP14.61□□□□□ -0.07
VCX3A-202ENST00000398729 GBP2P32456 591 aaPredicted RBP14.61□□□□□ -0.07
VCX3A-202ENST00000398729 OR1D2P34982 312 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 GTF2BQ00403 316 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 PPP2R3AQ06190 1150 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 PPM1LQ5SGD2 360 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 CCDC73Q6ZRK6 1079 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 SV2BQ7L1I2 683 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 DYMQ7RTS9 669 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 CCDC105Q8IYK2 499 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 RPF1Q9H9Y2 349 aaKnown RBP14.61□□□□□ -0.07
VCX3A-202ENST00000398729 KCNK12Q9HB15 430 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.61□□□□□ -0.07
VCX3A-202ENST00000398729 CDY1Q9Y6F8 540 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 SPTBN2O15020 2390 aa14.61□□□□□ -0.07
VCX3A-202ENST00000398729 TTC26A0AVF1 554 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 SYN3O14994 580 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 XPOTO43592 962 aaKnown RBP14.6□□□□□ -0.07
VCX3A-202ENST00000398729 N4BP1O75113 896 aaKnown RBP14.6□□□□□ -0.07
VCX3A-202ENST00000398729 C8AP07357 584 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 PDIA4P13667 645 aaKnown RBP14.6□□□□□ -0.07
VCX3A-202ENST00000398729 NMT1P30419 496 aaKnown RBP14.6□□□□□ -0.07
VCX3A-202ENST00000398729 HOXA9P31269 272 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 MCM4P33991 863 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 TNFSF9P41273 254 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 NASPP49321 788 aaPredicted RBP14.6□□□□□ -0.07
VCX3A-202ENST00000398729 TDGQ13569 410 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 STK38Q15208 465 aa14.6□□□□□ -0.07
VCX3A-202ENST00000398729 ANGPT1Q15389 498 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms