RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 SYDE1Q6ZW31 735 aaPredicted RBP7.91□□□□□ -1.14
RGPD1-201ENST00000398193 MREGQ8N565 214 aa7.91□□□□□ -1.14
RGPD1-201ENST00000398193 AENQ8WTP8 325 aaKnown RBP7.91□□□□□ -1.14
RGPD1-201ENST00000398193 TSC1Q92574 1164 aa7.91□□□□□ -1.14
RGPD1-201ENST00000398193 MIS12Q9H081 205 aa7.91□□□□□ -1.14
RGPD1-201ENST00000398193 PDGFCQ9NRA1 345 aa7.91□□□□□ -1.14
RGPD1-201ENST00000398193 STIM2Q9P246 746 aa7.91□□□□□ -1.14
RGPD1-201ENST00000398193 ANKFY1Q9P2R3 1169 aa7.91□□□□□ -1.14
RGPD1-201ENST00000398193 PSTPIP1O43586 416 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PHACTR2O75167 634 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PNMA6AP0CW24 399 aaPredicted RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PAX3P23760 479 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 TM4SF4P48230 202 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 AARSP49588 968 aaKnown RBP eCLIP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 NOP14P78316 857 aaKnown RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 BIRC3Q13489 604 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 DHX34Q14147 1143 aaKnown RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 IFNL1Q8IU54 200 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 COG1Q8WTW3 980 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 SLC20A1Q8WUM9 679 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 AFG1LQ8WV93 481 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 CD101Q93033 1021 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PCDHB18PQ96TA0 734 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 GCOM2Q9BZD3 368 aaPredicted RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PDZD7Q9H5P4 517 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 MED4Q9NPJ6 270 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 TFR2Q9UP52 801 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 ZNF865P0CJ78 1059 aaPredicted RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 HOXC8P31273 242 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 TRPC3Q13507 836 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 C8orf74Q6P047 294 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 MON1BQ7L1V2 547 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 MCOLN2Q8IZK6 566 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 C12orf50Q8NA57 414 aaPredicted RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 WHAMMQ8TF30 809 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PNKPQ96T60 521 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PTPN18Q99952 460 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 THAP2Q9H0W7 228 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 TOPORSQ9NS56 1045 aaPredicted RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 MGAMO43451 1857 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 ANK1P16157 1881 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 KRT5P13647 590 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PTPN7P35236 360 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PAK2Q13177 524 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 ZSWIM1Q9BR11 485 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 FUT8Q9BYC5 575 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 CDT1Q9H211 546 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 ADAMTS10Q9H324 1103 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PDE11AQ9HCR9 933 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 STRIP2Q9ULQ0 834 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PCDHB4Q9Y5E5 795 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PCDHA3Q9Y5H8 950 aa7.9□□□□□ -1.14
RGPD1-201ENST00000398193 V9GYY5 206 aaPredicted RBP7.9□□□□□ -1.14
RGPD1-201ENST00000398193 PDE2AO00408 941 aaPredicted RBP7.9□□□□□ -1.15
RGPD1-201ENST00000398193 SRGAP2O75044 1071 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 TBC1D8O95759 1140 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 EDN1P05305 212 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 MMEP08473 750 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 CYP3A5P20815 502 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 WDR78Q5VTH9 848 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 SLC47A2Q86VL8 602 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 GOLGA6L1Q8N7Z2 621 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 TATDN2Q93075 761 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 CAPZA3Q96KX2 299 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 SH2D3AQ9BRG2 576 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 HOMER3Q9NSC5 361 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 CTTNBP2NLQ9P2B4 639 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.9□□□□□ -1.15
RGPD1-201ENST00000398193 L1RE1Q9UN81 338 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 MROH7Q68CQ1 1323 aa7.9□□□□□ -1.15
RGPD1-201ENST00000398193 H3BRB1 525 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 LRRN2O75325 713 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 FTCDO95954 541 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 EIF4BP23588 611 aaKnown RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 ADCYAP1R1P41586 468 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 C2orf54Q08AI8 447 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 NAA30Q147X3 362 aaPredicted RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 SEL1L2Q5TEA6 688 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 ALS2CLQ60I27 953 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 EEPD1Q7L9B9 569 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 NOA1Q8NC60 698 aaKnown RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 C1orf131Q8NDD1 294 aaKnown RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 ZNF564Q8TBZ8 553 aaPredicted RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 SEC14L1Q92503 715 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 ADPGKQ9BRR6 497 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 FRMD8P1Q9BZ68 369 aaPredicted RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 TUT1Q9H6E5 874 aaKnown RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 KCNK3O14649 394 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 SORBS3O60504 671 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 TMEM191BP0C7N4 346 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 MARK3P27448 753 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 ACOT2P49753 483 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 ENOX2Q16206 610 aaKnown RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 CYP1B1Q16678 543 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 RPAINQ86UA6 219 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 RBBP8NLQ8NC74 664 aaPredicted RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 COPS5Q92905 334 aa7.89□□□□□ -1.15
RGPD1-201ENST00000398193 POP1Q99575 1024 aaKnown RBP7.89□□□□□ -1.15
RGPD1-201ENST00000398193 CFHR5Q9BXR6 569 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms